Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca8g00697 | ATGGAATTCATGCTCAGATTATCACTTTTGTTCTTTTTGTTGGCCTCTATATCCTTCATTGCAGAATCAAAGTGTAGGAGTTGTGGTTTAGCTTTAGCTTCCTACTATCTCTGGGATGGTTCTAACCTGACATATGTTTCAAAGATTATGAAATCCGAGGTTCTTACAAAACCTGAAGATATTGTCAGTTACAACACAAACATCACAAACAACAAAGACACTGTACAATCCTTTACCAGGGTGAATGTTCCATTCCCTTGTGATTGCATCAATGGGGAGTTTCTAGGACATACATTCCAATACTCAATTGGGTCAGGAGACACCTATTTGTCTGTTGCCAATGGGAACTATTCCAATTTGACCACTGCTGAGTGGTTGCAGAGCTTCAACCACTATAAACCAAATGATATTCCAGATACTGGAACACTTAATGTCACCATTAACTGTTCCTGCGGGAGCAGTGATGTTTCTAAGGAGTATGGATTGTTCATCACATACCCTCTTAGACCTGAAGATTCTTTGCAGTCAATTGCTAACCAGACTAACCTTGAGCCTGAGTTGCTGCAGAAGTACAACCCTGGTGTGAATTTTAGCCAAGGGAGTGGTTTGGTTTATATTCCAGGAAAAGAATGCAAACATTCATTCAGCTCATATATTGTTTCTACAGAAACAGGTTTAGCAGGTGGGGTCATTGCTGGAATATCTATTGGAGTAGTAGCAGGACTTCTACTATTAGCATTTTGTGTGTATGTTACATATTACCGAAGGAAGAAGTTATGGAAGAAAATGTTGCTCTCAGAAGAAGCCAGCGTGAACTCTGCTCAAGTTAAGAATGATGAGGTCTCTGGTGGTAATGCTACATATGGAAATTCAGATTTTGGTGGTGCTAACACCATTGGTATTAGGGTGGACAAATCTGCGGAATTTTCATATGAAGAACTTGCCAATGCCACAAATAATTTCAGTATGACTAACAAAATTGGTCAAGGTGGTTTTGGAGAAGTCTATTATGCAGAGCTGAACGGCGAGAAAGCTGCAATAAAAAAGATGAACATGGATGCAGAAGGAGTATTTCTAGCTGAACTCAAAGTGTTGACACGTGTTCATCACTTGAACCTGGTACGCTTGATCGGATATTGCATTAAGGAATCTCTTTTCCTTGTCTATGAATACATTGAGAATGGAAACTTAAGGCAACATTTACGTAATTCAGATGGAAAACCATTGCCATGGTCTACCCGGGTTCAAATTGCTCTGGATTCAGCCAGAGGTCTTGAATACATTCATGAGCATACAGTACCTACATATATCCATCGTGACATAAAGTCAGAAAATATTTTACTAGAAAAAAACTTCTGTGCAAAGGTTGCAGACTTTGGATTAACCAAGCTGATTGTTGGGAGTTCATCTATTCCCACTGCTAATATGGCAGGCACATTTGGTTACATGGCACCAGAATATGCATATGGCAGTGTTTCTCCCAAATTAGATGTCTATGCTTTTGGAGTTGTTCTTTGTGAGCTAATTTCAGGTAAAGAAGCTGTGATCAAGGGTGGTGTATCTGGTGCTGAATTAACAGGCCTTGTAACTCTGTTTGATGAAGTTTTTGATCAGCTAGATCCTCCAGAATGTCTTAAAAAACTGGTGGATCCTACACTTGGAGATAATTACTCAATTGATTCAGTTTTTAAGGTGGCACAAATTGCCAAAGCATGTACAGAGAGAGATCCACAACGACGTCCAAATATGAGCTCTGTTGTGGTTGCTCTTACCACACTTACTTCAAACACTGATGATTGGGACATTACTTCCATCTACCAAAATCCTGCTCTTGTAAATCTAATGTCTGGAAGATAG | 1857 | 0.3953 | MEFMLRLSLLFFLLASISFIAESKCRSCGLALASYYLWDGSNLTYVSKIMKSEVLTKPEDIVSYNTNITNNKDTVQSFTRVNVPFPCDCINGEFLGHTFQYSIGSGDTYLSVANGNYSNLTTAEWLQSFNHYKPNDIPDTGTLNVTINCSCGSSDVSKEYGLFITYPLRPEDSLQSIANQTNLEPELLQKYNPGVNFSQGSGLVYIPGKECKHSFSSYIVSTETGLAGGVIAGISIGVVAGLLLLAFCVYVTYYRRKKLWKKMLLSEEASVNSAQVKNDEVSGGNATYGNSDFGGANTIGIRVDKSAEFSYEELANATNNFSMTNKIGQGGFGEVYYAELNGEKAAIKKMNMDAEGVFLAELKVLTRVHHLNLVRLIGYCIKESLFLVYEYIENGNLRQHLRNSDGKPLPWSTRVQIALDSARGLEYIHEHTVPTYIHRDIKSENILLEKNFCAKVADFGLTKLIVGSSSIPTANMAGTFGYMAPEYAYGSVSPKLDVYAFGVVLCELISGKEAVIKGGVSGAELTGLVTLFDEVFDQLDPPECLKKLVDPTLGDNYSIDSVFKVAQIAKACTERDPQRRPNMSSVVVALTTLTSNTDDWDITSIYQNPALVNLMSGR. | 619 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca8g00697 | 618 | Pfam | Protein tyrosine and serine/threonine kinase | 322 | 589 | IPR001245 | GO:0004672|GO:0006468 | |
Seca8g00697 | 618 | SMART | serkin_6 | 321 | 594 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca8g00697 | 618 | SUPERFAMILY | Protein kinase-like (PK-like) | 301 | 590 | IPR011009 | - | |
Seca8g00697 | 618 | FunFam | PTI1-like tyrosine-protein kinase 3 | 392 | 604 | - | - | |
Seca8g00697 | 618 | ProSitePatterns | Protein kinases ATP-binding region signature. | 327 | 349 | IPR017441 | GO:0005524 | |
Seca8g00697 | 618 | PANTHER | CHITIN ELICITOR RECEPTOR KINASE 1-RELATED | 6 | 604 | IPR044812 | GO:0019199|GO:0045087 | |
Seca8g00697 | 618 | FunFam | LysM receptor kinase 2 | 300 | 391 | - | - | |
Seca8g00697 | 618 | ProSiteProfiles | Protein kinase domain profile. | 321 | 593 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca8g00697 | 618 | Gene3D | Phosphorylase Kinase; domain 1 | 295 | 391 | - | - | |
Seca8g00697 | 618 | Gene3D | Transferase(Phosphotransferase) domain 1 | 392 | 608 | - | - | |
Seca8g00697 | 618 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 436 | 448 | IPR008271 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca8g00697 | Seca-Chr8 | 8639641 | 8645700 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca8g00697 | 5 | 618 | Receptor kinase-like Gene Family | AT3G21630 | 55.414 | 0.0 | 666 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LysM | Seca8g00697 | PK_Tyr_Ser-Thr | 2.9e-45 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca8g00697 | - | K13429 | mtr:11432279 | 917.916 |