Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g00697 ATGGAATTCATGCTCAGATTATCACTTTTGTTCTTTTTGTTGGCCTCTATATCCTTCATTGCAGAATCAAAGTGTAGGAGTTGTGGTTTAGCTTTAGCTTCCTACTATCTCTGGGATGGTTCTAACCTGACATATGTTTCAAAGATTATGAAATCCGAGGTTCTTACAAAACCTGAAGATATTGTCAGTTACAACACAAACATCACAAACAACAAAGACACTGTACAATCCTTTACCAGGGTGAATGTTCCATTCCCTTGTGATTGCATCAATGGGGAGTTTCTAGGACATACATTCCAATACTCAATTGGGTCAGGAGACACCTATTTGTCTGTTGCCAATGGGAACTATTCCAATTTGACCACTGCTGAGTGGTTGCAGAGCTTCAACCACTATAAACCAAATGATATTCCAGATACTGGAACACTTAATGTCACCATTAACTGTTCCTGCGGGAGCAGTGATGTTTCTAAGGAGTATGGATTGTTCATCACATACCCTCTTAGACCTGAAGATTCTTTGCAGTCAATTGCTAACCAGACTAACCTTGAGCCTGAGTTGCTGCAGAAGTACAACCCTGGTGTGAATTTTAGCCAAGGGAGTGGTTTGGTTTATATTCCAGGAAAAGAATGCAAACATTCATTCAGCTCATATATTGTTTCTACAGAAACAGGTTTAGCAGGTGGGGTCATTGCTGGAATATCTATTGGAGTAGTAGCAGGACTTCTACTATTAGCATTTTGTGTGTATGTTACATATTACCGAAGGAAGAAGTTATGGAAGAAAATGTTGCTCTCAGAAGAAGCCAGCGTGAACTCTGCTCAAGTTAAGAATGATGAGGTCTCTGGTGGTAATGCTACATATGGAAATTCAGATTTTGGTGGTGCTAACACCATTGGTATTAGGGTGGACAAATCTGCGGAATTTTCATATGAAGAACTTGCCAATGCCACAAATAATTTCAGTATGACTAACAAAATTGGTCAAGGTGGTTTTGGAGAAGTCTATTATGCAGAGCTGAACGGCGAGAAAGCTGCAATAAAAAAGATGAACATGGATGCAGAAGGAGTATTTCTAGCTGAACTCAAAGTGTTGACACGTGTTCATCACTTGAACCTGGTACGCTTGATCGGATATTGCATTAAGGAATCTCTTTTCCTTGTCTATGAATACATTGAGAATGGAAACTTAAGGCAACATTTACGTAATTCAGATGGAAAACCATTGCCATGGTCTACCCGGGTTCAAATTGCTCTGGATTCAGCCAGAGGTCTTGAATACATTCATGAGCATACAGTACCTACATATATCCATCGTGACATAAAGTCAGAAAATATTTTACTAGAAAAAAACTTCTGTGCAAAGGTTGCAGACTTTGGATTAACCAAGCTGATTGTTGGGAGTTCATCTATTCCCACTGCTAATATGGCAGGCACATTTGGTTACATGGCACCAGAATATGCATATGGCAGTGTTTCTCCCAAATTAGATGTCTATGCTTTTGGAGTTGTTCTTTGTGAGCTAATTTCAGGTAAAGAAGCTGTGATCAAGGGTGGTGTATCTGGTGCTGAATTAACAGGCCTTGTAACTCTGTTTGATGAAGTTTTTGATCAGCTAGATCCTCCAGAATGTCTTAAAAAACTGGTGGATCCTACACTTGGAGATAATTACTCAATTGATTCAGTTTTTAAGGTGGCACAAATTGCCAAAGCATGTACAGAGAGAGATCCACAACGACGTCCAAATATGAGCTCTGTTGTGGTTGCTCTTACCACACTTACTTCAAACACTGATGATTGGGACATTACTTCCATCTACCAAAATCCTGCTCTTGTAAATCTAATGTCTGGAAGATAG 1857 0.3953 MEFMLRLSLLFFLLASISFIAESKCRSCGLALASYYLWDGSNLTYVSKIMKSEVLTKPEDIVSYNTNITNNKDTVQSFTRVNVPFPCDCINGEFLGHTFQYSIGSGDTYLSVANGNYSNLTTAEWLQSFNHYKPNDIPDTGTLNVTINCSCGSSDVSKEYGLFITYPLRPEDSLQSIANQTNLEPELLQKYNPGVNFSQGSGLVYIPGKECKHSFSSYIVSTETGLAGGVIAGISIGVVAGLLLLAFCVYVTYYRRKKLWKKMLLSEEASVNSAQVKNDEVSGGNATYGNSDFGGANTIGIRVDKSAEFSYEELANATNNFSMTNKIGQGGFGEVYYAELNGEKAAIKKMNMDAEGVFLAELKVLTRVHHLNLVRLIGYCIKESLFLVYEYIENGNLRQHLRNSDGKPLPWSTRVQIALDSARGLEYIHEHTVPTYIHRDIKSENILLEKNFCAKVADFGLTKLIVGSSSIPTANMAGTFGYMAPEYAYGSVSPKLDVYAFGVVLCELISGKEAVIKGGVSGAELTGLVTLFDEVFDQLDPPECLKKLVDPTLGDNYSIDSVFKVAQIAKACTERDPQRRPNMSSVVVALTTLTSNTDDWDITSIYQNPALVNLMSGR. 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g00697 618 Pfam Protein tyrosine and serine/threonine kinase 322 589 IPR001245 GO:0004672|GO:0006468
Seca8g00697 618 SMART serkin_6 321 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g00697 618 SUPERFAMILY Protein kinase-like (PK-like) 301 590 IPR011009 -
Seca8g00697 618 FunFam PTI1-like tyrosine-protein kinase 3 392 604 - -
Seca8g00697 618 ProSitePatterns Protein kinases ATP-binding region signature. 327 349 IPR017441 GO:0005524
Seca8g00697 618 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 6 604 IPR044812 GO:0019199|GO:0045087
Seca8g00697 618 FunFam LysM receptor kinase 2 300 391 - -
Seca8g00697 618 ProSiteProfiles Protein kinase domain profile. 321 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g00697 618 Gene3D Phosphorylase Kinase; domain 1 295 391 - -
Seca8g00697 618 Gene3D Transferase(Phosphotransferase) domain 1 392 608 - -
Seca8g00697 618 ProSitePatterns Serine/Threonine protein kinases active-site signature. 436 448 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g00697 Seca-Chr8 8639641 8645700 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g00697 5 618 Receptor kinase-like Gene Family AT3G21630 55.414 0.0 666
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Seca8g00697 PK_Tyr_Ser-Thr 2.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g00697 - K13429 mtr:11432279 917.916