Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca8g00696 | ATGAAACCCAGATTCAGGTTTTCACTTTCCTTCTTCTTATTGGCCTATAATATATCGTTCAGTGCAGAATCAAAGTGCAGCAAAGGTTGTAATTTAGCTCTAGCTTCCTACTATCTATGGTATGGTTCCAACCTAACATATATTTCAAAGATTATGGAATCCAGTGTTCTTTCAAAGCCTGAAGATATTGTGAGCTACAACAATGATTCTGTCACATTCGCCAGCAGGGTTAACATTCCATTCCCTTGTGATTGCATCAATGGTGAGTTTCTGGGTCACACGTTTCTCTACGAGCTTCAGCCAGGGGAGACCTATACAACAGTGGCTAACAAGACCTTTTCCAATTTGACAACTGATGTGTTGATGCAAAGCTTCAACATTTATCGACCAACAAATATTCCTGATTTTGGAATCCTTAATGTCACTGTTAACTGTTCCTGTGGGAACAGTGAGGTTTCTATGGATTATGGGTTGTTCATCACATACCCTCTTAGACCTGAGGACACTTTGCAGTCCATTGCAAACCAGACCAAGATTGAGGCTGAGTTGCTGCAAAGGTACAACCCGGGTGTGGATTTTAGCCAAGGAAGTGGTCTGGTTTTCATTCCAGGGAAAGGTCTAGCAGGTGGAGCTATTGCTGGAATATCTATAGGAGTAATAGCAGGGGTTTTATTATTGGCATTTTGTATGTATATTAAGTATCACCTAAAGAAGAAGGCACAATTGAAAAATTTGACCATGGATGATTCCACGGTGAACTCTGCTGGAGTTAGTAAAGATTTTGGTGGTCCTTCCGTTGATGGTGGTGCTGACATCACAGGCACTACGGTGGAAGAATCACAAGAGTTTTCATACAAAGAACTGGCCAATGCCACAAATAACTTCAGTATGGCTAATAAAATTGGTCAAGGTGGTTTTGGGGTAGTATACTATGCAGAGCTGAGAGGGGAGAAAGCTGCTATCAAGAAGATGAATATGAAAGCAAAGAGAGAATTTCTTGCTGAATTGAAAGTCTTAACTCATGTTCATCACTTGAACCTGGTACGTTTGATTGGATATTGTGTTGAGGGTTCTCTCTTCCTTGTATATGAATACATTGACAATGGAAACTTAAAACAAAATCTACATGATTCAGTAGTAATTACTGATCAAGTCAAACTGTTGTCAGAAAGAGAACCTTTGTCATGGTCTACAAGGATGCAAATTGCTCTGGATTCAGCCAGAGGTATTGAATACATTCATGAGCATACAGTGCCTGTATATATTCATCGTGACATAAAGTCAGAAAATATTTTATTAGACAAAAGCTTCCGTGCAAAGGTTGCAGATTGTGGATTGACAAAGCTGGCTGAAGTTGGAAATTCAACCACTTCAGCGAAGGGTACATTCGGTTACATGCCACCAGAGTTTGATGAATTCTTTTTGTCTCTTCAAGTGATAGCTAACTTTGCCATAGGAGCTTGTTTGAGATATGTGTCAGGCAGGGTTTCTCCTTCTCCCAAGATAGATGTCTATGCCTTTGGAGTTGTTCTTTATGAACTTATTTCTGCTAAAGAAGCTGTAATCCAAGTTGGTGCTGAAGCAAAAGGCCTTGTAGCTTTGTTTAATGAAGTTTTTGATCACCAACCAGACCCAATGGAAGGTCTTAAAAATCTGGTGGATCCAAGGCTTGGAGATAACTACCCAATTGATTCAGTTTACAAGATGGCACAACTTGCCAAAGCTTGTACAGAGGGTGATCCACAACGACGTCCAACTATGAGATATATTGTGGTTGCTCTTATGACACTTACTTCAAACACTGAGGATTGGAATATTGCATCCTTCTATGAAAATCCAACCCTTGTTCCTCTCAGTGACCAAATGAAACTCAAAAATGGTTTACTCTTGTTCTTTCTGTTGCTTGAGTATGTTTGTTTCAAGGTGGAATCCAAGTGTGTGAAGGGGTGTGATTTAGCTTTAGCTTCTTACTATGTCATGCCTAATATTTTTCTAGAAGGCAATATAACACGCTTCATGAGATCAACAATTGTGTCCAATTCTGATGTTATTATCAGCTACAACAAAGGCAAAATATTCAATAATGATATTCTTCTAGCCTTTCTCAGACTCAACATTCCATTCCCATGTGACTGTATTGGTGGTGAATTTCTGGGGCATGTGTTTGAGTACACAACTGATGCAGGTGACACCTATAATTTAATTGCCAACAACTACTATGCTAATCTTACCACAGTAGAGCTTTTGAAAAGGTTCAATAGCTATGATCCAAATCATATACCTGCTAATGCCAAGATTAATGTCACTATCAATTGTTCTTGTGGGGACAGTCAGATTTCAGAAGATTATGGGTTGTTTGTTACCTATCCTCTCAGGACTGGGGATACACTGCAAGTTATTGCAAACCAAACTAGTCTTGATGCAGAGTTGCTGCAGAGTTATAATCCAAGTGTTAATTTCAGCAAAGGGAGTGGAATAGTTTTCATTCCAGGAAGAGATCAAAATGGAGACTATGTTCCTTTATACCCTAGGAAAACAGGTCTAGCTACAAGTGCTGCTGTTGGTATATCTATAGCAGGAATATGTGGCCTTCTATTATTGATAATTTGTATATATGCCAAATACTTCAAGAAGAAGGAAGAAGAGAAAGCTAAATTGCCAACAGAAGTTTCTGTGCCGCTTTCAACTCAAGATGCTTCTAGTAGTGCAGAATATGAAACTTCAGGATCCTCTGGGCCTGCTCCTGGTAGTGTTGCTGGCCTTACAAGCATTATGGTGGCAAAATCAATGGAGTTTTCATATCAAGAACTAGCCAAAGCTACAAATAACTTCAGCTTGGAAAATAAAATTGGTCAAGGTGGATTTGGAGCTGTCTATTATGCAGAACTGAGAGGCGAGAAAACAGCAATTAAGAAGATGGACGTACAAGCATCAACAGAATTTCTGTGTGAGTTGAAGGTGCGCTTGATTGGATATTGCGTTGAGGGATCTCTATTCCTTGTATATGAATATATTGACAATGGAAACTTAGGCCAATATTTGCATGGTACAGGTAAAGATCCATTACCATGGTCTAGCAGAGTGCAAATTGCTCTTGATTCAGCAAGAGGCCTTGAATACATTCATGAGCACACTGTGCCTGTATATGCTCAATATGGTGATGTTTCTCCAAAAATAGATGTGTATGCTTTTGGAGTTGTTCTTTATGAACTTATTTCTGCAAAGAATGCTATTCTGAAGACAGGTGAATCTGTTGTTGAATCAAAGGGTCTTGTAGCTTTGTTTGAAGAAGCACTTAATCAAAGTGATCCTTTGGAAGGTCTTCGCAAACTGGTGGATCCTAGGCTTGGAGAAAACTATCCAATTGATTCTGTTCTCAAGATGGCCCAACTTGGGAGAGCTTGTACAAGAGATAACCCACTATTGCGCCCAAGTATGAGATCTATAGTTGTTGCTCTTATGACACTTTCATCACCTACTGAGGATTGTGATGATGATACTTCCTATGAAAATCAAACTCTCATAAATCTATTGTCAGTGAGATGA | 3546 | 0.3931 | MKPRFRFSLSFFLLAYNISFSAESKCSKGCNLALASYYLWYGSNLTYISKIMESSVLSKPEDIVSYNNDSVTFASRVNIPFPCDCINGEFLGHTFLYELQPGETYTTVANKTFSNLTTDVLMQSFNIYRPTNIPDFGILNVTVNCSCGNSEVSMDYGLFITYPLRPEDTLQSIANQTKIEAELLQRYNPGVDFSQGSGLVFIPGKGLAGGAIAGISIGVIAGVLLLAFCMYIKYHLKKKAQLKNLTMDDSTVNSAGVSKDFGGPSVDGGADITGTTVEESQEFSYKELANATNNFSMANKIGQGGFGVVYYAELRGEKAAIKKMNMKAKREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIDNGNLKQNLHDSVVITDQVKLLSEREPLSWSTRMQIALDSARGIEYIHEHTVPVYIHRDIKSENILLDKSFRAKVADCGLTKLAEVGNSTTSAKGTFGYMPPEFDEFFLSLQVIANFAIGACLRYVSGRVSPSPKIDVYAFGVVLYELISAKEAVIQVGAEAKGLVALFNEVFDHQPDPMEGLKNLVDPRLGDNYPIDSVYKMAQLAKACTEGDPQRRPTMRYIVVALMTLTSNTEDWNIASFYENPTLVPLSDQMKLKNGLLLFFLLLEYVCFKVESKCVKGCDLALASYYVMPNIFLEGNITRFMRSTIVSNSDVIISYNKGKIFNNDILLAFLRLNIPFPCDCIGGEFLGHVFEYTTDAGDTYNLIANNYYANLTTVELLKRFNSYDPNHIPANAKINVTINCSCGDSQISEDYGLFVTYPLRTGDTLQVIANQTSLDAELLQSYNPSVNFSKGSGIVFIPGRDQNGDYVPLYPRKTGLATSAAVGISIAGICGLLLLIICIYAKYFKKKEEEKAKLPTEVSVPLSTQDASSSAEYETSGSSGPAPGSVAGLTSIMVAKSMEFSYQELAKATNNFSLENKIGQGGFGAVYYAELRGEKTAIKKMDVQASTEFLCELKVRLIGYCVEGSLFLVYEYIDNGNLGQYLHGTGKDPLPWSSRVQIALDSARGLEYIHEHTVPVYAQYGDVSPKIDVYAFGVVLYELISAKNAILKTGESVVESKGLVALFEEALNQSDPLEGLRKLVDPRLGENYPIDSVLKMAQLGRACTRDNPLLRPSMRSIVVALMTLSSPTEDCDDDTSYENQTLINLLSVR. | 1182 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca8g00696 | 1181 | Pfam | Protein tyrosine and serine/threonine kinase | 945 | 1045 | IPR001245 | GO:0004672|GO:0006468 | |
Seca8g00696 | 1181 | Pfam | Protein tyrosine and serine/threonine kinase | 297 | 593 | IPR001245 | GO:0004672|GO:0006468 | |
Seca8g00696 | 1181 | Coils | Coil | 311 | 331 | - | - | |
Seca8g00696 | 1181 | ProSitePatterns | Protein kinases ATP-binding region signature. | 950 | 972 | IPR017441 | GO:0005524 | |
Seca8g00696 | 1181 | SUPERFAMILY | Protein kinase-like (PK-like) | 278 | 594 | IPR011009 | - | |
Seca8g00696 | 1181 | FunFam | PTI1-like tyrosine-protein kinase 3 | 366 | 608 | - | - | |
Seca8g00696 | 1181 | Pfam | LysM domain | 165 | 192 | IPR018392 | - | |
Seca8g00696 | 1181 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1048 | 1176 | - | - | |
Seca8g00696 | 1181 | Gene3D | Transferase(Phosphotransferase) domain 1 | 366 | 612 | - | - | |
Seca8g00696 | 1181 | Gene3D | Phosphorylase Kinase; domain 1 | 919 | 999 | - | - | |
Seca8g00696 | 1181 | Gene3D | Phosphorylase Kinase; domain 1 | 270 | 365 | - | - | |
Seca8g00696 | 1181 | ProSitePatterns | Protein kinases ATP-binding region signature. | 301 | 323 | IPR017441 | GO:0005524 | |
Seca8g00696 | 1181 | PANTHER | CHITIN ELICITOR RECEPTOR KINASE 1-RELATED | 11 | 607 | IPR044812 | GO:0019199|GO:0045087 | |
Seca8g00696 | 1181 | SUPERFAMILY | Protein kinase-like (PK-like) | 925 | 1153 | IPR011009 | - | |
Seca8g00696 | 1181 | SMART | serkin_6 | 295 | 596 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca8g00696 | 1181 | FunFam | LysM receptor kinase 2 | 274 | 365 | - | - | |
Seca8g00696 | 1181 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 421 | 433 | IPR008271 | GO:0004672|GO:0006468 | |
Seca8g00696 | 1181 | ProSiteProfiles | Protein kinase domain profile. | 295 | 597 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca8g00696 | 1181 | ProSiteProfiles | Protein kinase domain profile. | 944 | 1181 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca8g00696 | 1181 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1000 | 1047 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca8g00696 | Seca-Chr8 | 8621378 | 8632225 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca8g00696 | 13 | 618 | Receptor kinase-like Gene Family | AT3G21630 | 52.336 | 0.0 | 616 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-I-1 | Seca8g00696 | PK_Tyr_Ser-Thr | 1.5e-37 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca8g00696 | - | K13429 | gmx:100792559 | 827.394 |