Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g00696 ATGAAACCCAGATTCAGGTTTTCACTTTCCTTCTTCTTATTGGCCTATAATATATCGTTCAGTGCAGAATCAAAGTGCAGCAAAGGTTGTAATTTAGCTCTAGCTTCCTACTATCTATGGTATGGTTCCAACCTAACATATATTTCAAAGATTATGGAATCCAGTGTTCTTTCAAAGCCTGAAGATATTGTGAGCTACAACAATGATTCTGTCACATTCGCCAGCAGGGTTAACATTCCATTCCCTTGTGATTGCATCAATGGTGAGTTTCTGGGTCACACGTTTCTCTACGAGCTTCAGCCAGGGGAGACCTATACAACAGTGGCTAACAAGACCTTTTCCAATTTGACAACTGATGTGTTGATGCAAAGCTTCAACATTTATCGACCAACAAATATTCCTGATTTTGGAATCCTTAATGTCACTGTTAACTGTTCCTGTGGGAACAGTGAGGTTTCTATGGATTATGGGTTGTTCATCACATACCCTCTTAGACCTGAGGACACTTTGCAGTCCATTGCAAACCAGACCAAGATTGAGGCTGAGTTGCTGCAAAGGTACAACCCGGGTGTGGATTTTAGCCAAGGAAGTGGTCTGGTTTTCATTCCAGGGAAAGGTCTAGCAGGTGGAGCTATTGCTGGAATATCTATAGGAGTAATAGCAGGGGTTTTATTATTGGCATTTTGTATGTATATTAAGTATCACCTAAAGAAGAAGGCACAATTGAAAAATTTGACCATGGATGATTCCACGGTGAACTCTGCTGGAGTTAGTAAAGATTTTGGTGGTCCTTCCGTTGATGGTGGTGCTGACATCACAGGCACTACGGTGGAAGAATCACAAGAGTTTTCATACAAAGAACTGGCCAATGCCACAAATAACTTCAGTATGGCTAATAAAATTGGTCAAGGTGGTTTTGGGGTAGTATACTATGCAGAGCTGAGAGGGGAGAAAGCTGCTATCAAGAAGATGAATATGAAAGCAAAGAGAGAATTTCTTGCTGAATTGAAAGTCTTAACTCATGTTCATCACTTGAACCTGGTACGTTTGATTGGATATTGTGTTGAGGGTTCTCTCTTCCTTGTATATGAATACATTGACAATGGAAACTTAAAACAAAATCTACATGATTCAGTAGTAATTACTGATCAAGTCAAACTGTTGTCAGAAAGAGAACCTTTGTCATGGTCTACAAGGATGCAAATTGCTCTGGATTCAGCCAGAGGTATTGAATACATTCATGAGCATACAGTGCCTGTATATATTCATCGTGACATAAAGTCAGAAAATATTTTATTAGACAAAAGCTTCCGTGCAAAGGTTGCAGATTGTGGATTGACAAAGCTGGCTGAAGTTGGAAATTCAACCACTTCAGCGAAGGGTACATTCGGTTACATGCCACCAGAGTTTGATGAATTCTTTTTGTCTCTTCAAGTGATAGCTAACTTTGCCATAGGAGCTTGTTTGAGATATGTGTCAGGCAGGGTTTCTCCTTCTCCCAAGATAGATGTCTATGCCTTTGGAGTTGTTCTTTATGAACTTATTTCTGCTAAAGAAGCTGTAATCCAAGTTGGTGCTGAAGCAAAAGGCCTTGTAGCTTTGTTTAATGAAGTTTTTGATCACCAACCAGACCCAATGGAAGGTCTTAAAAATCTGGTGGATCCAAGGCTTGGAGATAACTACCCAATTGATTCAGTTTACAAGATGGCACAACTTGCCAAAGCTTGTACAGAGGGTGATCCACAACGACGTCCAACTATGAGATATATTGTGGTTGCTCTTATGACACTTACTTCAAACACTGAGGATTGGAATATTGCATCCTTCTATGAAAATCCAACCCTTGTTCCTCTCAGTGACCAAATGAAACTCAAAAATGGTTTACTCTTGTTCTTTCTGTTGCTTGAGTATGTTTGTTTCAAGGTGGAATCCAAGTGTGTGAAGGGGTGTGATTTAGCTTTAGCTTCTTACTATGTCATGCCTAATATTTTTCTAGAAGGCAATATAACACGCTTCATGAGATCAACAATTGTGTCCAATTCTGATGTTATTATCAGCTACAACAAAGGCAAAATATTCAATAATGATATTCTTCTAGCCTTTCTCAGACTCAACATTCCATTCCCATGTGACTGTATTGGTGGTGAATTTCTGGGGCATGTGTTTGAGTACACAACTGATGCAGGTGACACCTATAATTTAATTGCCAACAACTACTATGCTAATCTTACCACAGTAGAGCTTTTGAAAAGGTTCAATAGCTATGATCCAAATCATATACCTGCTAATGCCAAGATTAATGTCACTATCAATTGTTCTTGTGGGGACAGTCAGATTTCAGAAGATTATGGGTTGTTTGTTACCTATCCTCTCAGGACTGGGGATACACTGCAAGTTATTGCAAACCAAACTAGTCTTGATGCAGAGTTGCTGCAGAGTTATAATCCAAGTGTTAATTTCAGCAAAGGGAGTGGAATAGTTTTCATTCCAGGAAGAGATCAAAATGGAGACTATGTTCCTTTATACCCTAGGAAAACAGGTCTAGCTACAAGTGCTGCTGTTGGTATATCTATAGCAGGAATATGTGGCCTTCTATTATTGATAATTTGTATATATGCCAAATACTTCAAGAAGAAGGAAGAAGAGAAAGCTAAATTGCCAACAGAAGTTTCTGTGCCGCTTTCAACTCAAGATGCTTCTAGTAGTGCAGAATATGAAACTTCAGGATCCTCTGGGCCTGCTCCTGGTAGTGTTGCTGGCCTTACAAGCATTATGGTGGCAAAATCAATGGAGTTTTCATATCAAGAACTAGCCAAAGCTACAAATAACTTCAGCTTGGAAAATAAAATTGGTCAAGGTGGATTTGGAGCTGTCTATTATGCAGAACTGAGAGGCGAGAAAACAGCAATTAAGAAGATGGACGTACAAGCATCAACAGAATTTCTGTGTGAGTTGAAGGTGCGCTTGATTGGATATTGCGTTGAGGGATCTCTATTCCTTGTATATGAATATATTGACAATGGAAACTTAGGCCAATATTTGCATGGTACAGGTAAAGATCCATTACCATGGTCTAGCAGAGTGCAAATTGCTCTTGATTCAGCAAGAGGCCTTGAATACATTCATGAGCACACTGTGCCTGTATATGCTCAATATGGTGATGTTTCTCCAAAAATAGATGTGTATGCTTTTGGAGTTGTTCTTTATGAACTTATTTCTGCAAAGAATGCTATTCTGAAGACAGGTGAATCTGTTGTTGAATCAAAGGGTCTTGTAGCTTTGTTTGAAGAAGCACTTAATCAAAGTGATCCTTTGGAAGGTCTTCGCAAACTGGTGGATCCTAGGCTTGGAGAAAACTATCCAATTGATTCTGTTCTCAAGATGGCCCAACTTGGGAGAGCTTGTACAAGAGATAACCCACTATTGCGCCCAAGTATGAGATCTATAGTTGTTGCTCTTATGACACTTTCATCACCTACTGAGGATTGTGATGATGATACTTCCTATGAAAATCAAACTCTCATAAATCTATTGTCAGTGAGATGA 3546 0.3931 MKPRFRFSLSFFLLAYNISFSAESKCSKGCNLALASYYLWYGSNLTYISKIMESSVLSKPEDIVSYNNDSVTFASRVNIPFPCDCINGEFLGHTFLYELQPGETYTTVANKTFSNLTTDVLMQSFNIYRPTNIPDFGILNVTVNCSCGNSEVSMDYGLFITYPLRPEDTLQSIANQTKIEAELLQRYNPGVDFSQGSGLVFIPGKGLAGGAIAGISIGVIAGVLLLAFCMYIKYHLKKKAQLKNLTMDDSTVNSAGVSKDFGGPSVDGGADITGTTVEESQEFSYKELANATNNFSMANKIGQGGFGVVYYAELRGEKAAIKKMNMKAKREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIDNGNLKQNLHDSVVITDQVKLLSEREPLSWSTRMQIALDSARGIEYIHEHTVPVYIHRDIKSENILLDKSFRAKVADCGLTKLAEVGNSTTSAKGTFGYMPPEFDEFFLSLQVIANFAIGACLRYVSGRVSPSPKIDVYAFGVVLYELISAKEAVIQVGAEAKGLVALFNEVFDHQPDPMEGLKNLVDPRLGDNYPIDSVYKMAQLAKACTEGDPQRRPTMRYIVVALMTLTSNTEDWNIASFYENPTLVPLSDQMKLKNGLLLFFLLLEYVCFKVESKCVKGCDLALASYYVMPNIFLEGNITRFMRSTIVSNSDVIISYNKGKIFNNDILLAFLRLNIPFPCDCIGGEFLGHVFEYTTDAGDTYNLIANNYYANLTTVELLKRFNSYDPNHIPANAKINVTINCSCGDSQISEDYGLFVTYPLRTGDTLQVIANQTSLDAELLQSYNPSVNFSKGSGIVFIPGRDQNGDYVPLYPRKTGLATSAAVGISIAGICGLLLLIICIYAKYFKKKEEEKAKLPTEVSVPLSTQDASSSAEYETSGSSGPAPGSVAGLTSIMVAKSMEFSYQELAKATNNFSLENKIGQGGFGAVYYAELRGEKTAIKKMDVQASTEFLCELKVRLIGYCVEGSLFLVYEYIDNGNLGQYLHGTGKDPLPWSSRVQIALDSARGLEYIHEHTVPVYAQYGDVSPKIDVYAFGVVLYELISAKNAILKTGESVVESKGLVALFEEALNQSDPLEGLRKLVDPRLGENYPIDSVLKMAQLGRACTRDNPLLRPSMRSIVVALMTLSSPTEDCDDDTSYENQTLINLLSVR. 1182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g00696 1181 Pfam Protein tyrosine and serine/threonine kinase 945 1045 IPR001245 GO:0004672|GO:0006468
Seca8g00696 1181 Pfam Protein tyrosine and serine/threonine kinase 297 593 IPR001245 GO:0004672|GO:0006468
Seca8g00696 1181 Coils Coil 311 331 - -
Seca8g00696 1181 ProSitePatterns Protein kinases ATP-binding region signature. 950 972 IPR017441 GO:0005524
Seca8g00696 1181 SUPERFAMILY Protein kinase-like (PK-like) 278 594 IPR011009 -
Seca8g00696 1181 FunFam PTI1-like tyrosine-protein kinase 3 366 608 - -
Seca8g00696 1181 Pfam LysM domain 165 192 IPR018392 -
Seca8g00696 1181 Gene3D Transferase(Phosphotransferase) domain 1 1048 1176 - -
Seca8g00696 1181 Gene3D Transferase(Phosphotransferase) domain 1 366 612 - -
Seca8g00696 1181 Gene3D Phosphorylase Kinase; domain 1 919 999 - -
Seca8g00696 1181 Gene3D Phosphorylase Kinase; domain 1 270 365 - -
Seca8g00696 1181 ProSitePatterns Protein kinases ATP-binding region signature. 301 323 IPR017441 GO:0005524
Seca8g00696 1181 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 11 607 IPR044812 GO:0019199|GO:0045087
Seca8g00696 1181 SUPERFAMILY Protein kinase-like (PK-like) 925 1153 IPR011009 -
Seca8g00696 1181 SMART serkin_6 295 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g00696 1181 FunFam LysM receptor kinase 2 274 365 - -
Seca8g00696 1181 ProSitePatterns Serine/Threonine protein kinases active-site signature. 421 433 IPR008271 GO:0004672|GO:0006468
Seca8g00696 1181 ProSiteProfiles Protein kinase domain profile. 295 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g00696 1181 ProSiteProfiles Protein kinase domain profile. 944 1181 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g00696 1181 Gene3D Transferase(Phosphotransferase) domain 1 1000 1047 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g00696 Seca-Chr8 8621378 8632225 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g00696 13 618 Receptor kinase-like Gene Family AT3G21630 52.336 0.0 616
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Seca8g00696 PK_Tyr_Ser-Thr 1.5e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g00696 - K13429 gmx:100792559 827.394