Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca8g00670 | ATGACTAGAACTAGGAGTATCGCTATCACACTCTTGTTAGTTATTTCCTTCTTGCATATTGCCTCTGCTCTGGTCTCTGATGATGGGGTGACTCTGTTATCGCTCTTGAAAAGCTGGACCTTTGTTCCTTCCAACATCAGCTCAAGCTGGAACACCTCTGATTCTATTCCATGCTCATGGGTTGGAGTTCAATGCGACCATGCCCACAATGTGATCTCCCTTAACCTAACTCATCAAGGTATTTTTGGTCAACTTGGTACAGAAATTGGAAATTTGTATCACTTGCAGACCCTTGTGTTGTTGGGTAATGGTTTCTCAGGAAAAATACCTTCAGAGTTAAGCAACTGTAGTTTACTTGTGTATTTAGACCTTTCTGGAAACAACTTCAGTGGACAGATACCATATAGCTTTAAAAAGTTGCAAAATTTACAGTATTTGAGCTTGTCTTCTAATCTGCTGACTGGTGAAATTCCAGATTCCTTGTTTCAAATTTCTTCTCTGGAAGAACTGAGCCTGCATAGTAACCTTCTTAGTGGTCCTGTCCCAACCAATATTGGGAACTTGACCAAACTATTGAGGTTGTATCTATATGGTAATCAGTTGTCAGGGACTATTCCTTCATCCATTGGTAATTGCAGTAAATTAGAGGACCTTGAATTGTCTTTCAACCGTTTGACAGGTGAAATTCCAGTCACTGTTTGGAGAATTCCAAGTCTTAAGCACATCTTGGTGCACAACAACAGCCTTTTTGGGGAACTTCCTTTGGAGATGACAAAGCTCAAGCATCTAAAAAATATCTCATTGTTTGACAACCAGTTCTCTGGAGTCATACCTCAAAGCTTGGGGATCAACAGCAGCTTGGTGAAGTTGGACTGTATGAATAATAAGTTCACTGGTAATATCCCACCCAATCTTTGCTTTGGAAAGCAATTGATTGAGCTCAATATGGGAATTAATCAACTTCAAGGTGGCATACCTTCTGATGTAGGGAGATGTGTAACTCTAAGGAGGTTGATTCTCAAAGAAAATAATTTCACTGGGTCTCTTCCGGATTTTGAAAGTAATCCAAACCTCATATACATGGACATAAGCAAGAACAATATCAGTGGACCAATTCCATCAAGTTTGGGAAATTGCAGAAACCTCACTTACATTAATTTGTCCATGAACAAATTTACTGGGCCAATACCATCTCAGTTTGGAAAGCTTGTGAATCTTGTGATTTTGGATCTTGCTCACAACAACTTGGAAGGTACTTTGCCACCTCAGCTATCAAATTGTACTAAAATGGATTGTTTTGATGTGGGATTCAATTTCCTAAATGGCTCACTCCCATCAAATTTGAGTAGTTGGACAGGGATAACCACGTTGATTTTAAGGGAGAATTATTTTTCAGGGGGTATCCCGGACTTTTTGGCAAAATTTAACAACCTTCGTGAGTTACAATTTGGTGGAAATTTGTTTGGAGGCAAAATTCCTCAATCAATAGGATCATTAAAGAATCTGTTCTATGGATTGAATCTGAGTGCTAATGGATTGACAGGTGACATTCCCGCAGAAATTAGAAATCTGGAACTGCTGCAAAGTCTGGATATATCCTTGAACAATTTGACAGGAAAGCTAGATTTTCTTGAAAGTCTTGGTTCATTAATTGAGGTCAATATTTCTTACAATTTCTTCTATGGTCCTGTACCAGAAACAACAGGGCTAATGAAGGCATTGAATTCCTCACCTTCATCATTCATGGGCAATCCTCTTCTTTGCGTTAGTTGCTTGAATTGCATTAAAACTAGTTATGTGAAGCCTTGTGTCTACATATCAACTGATCACAAAGGTATCAGTAAAATTGGAATTGTGATGATAGAATTGGGATCCTCAGTAATTATTTCTGCCCTGCTGCTAATAATAATTCGAATGTATCTCCTCGGAAGATATAAGCAGGAATTCAATGAGAAATGGGGGATTGATTCTGCCTCTGATTACCCGGAGTCATTTATTGAAAGAGGAGGAGGACGGAGGATTGGATTCATGTATGAGCGTGAAGTGAACATCTTAGCTGAAAAGAAGCCATCTGCCCTTCAGGACCTAGTGTTGAAGGCTACAAAGAACCTAGATGATCAGTATATTGTTGGCATAGGAGCACATGGTATTGTGTATAAAGCCCAACTAGGTGAACTGGTTTTTGCTGCAAAGAAGGTTGCATTTGCAAGGAACAAGCAAAGGTGCCTAAGTATCATGCACAAAGAAATTAAAGTCCTTGGGATGTTTAAGCATCGGAATTTGATCACTTATGCAGACTACTGGTTTGGAGAGGACTATGGTTTAATCTTATATGAGTTTATGGAAAATGGAAGCCTTCATGATGTTTTGCATGAAAAGAAACCCCCACCAGCCTTAACATGGAATGACCGGTTTAAGATAGCTGTTGGAATTGCTGAAGGACTAGCATATCTGCATTATGATATTAGCCCACCCATAGTGCACAGAGACATCAAACCAAAGAATATACTTCTTGATGCTAATATGGAGCCTCTTATAGCTGATTTTGGCACTGCCCTGTACAGGAACCTGTCTGAGGATTCTAATACTTATTCTGGAACCAGGAAAATGCTATCATCCAACGTTGCTGGTACCCCTGGCTATATTGCACCAGAGAATGCATATGCAATAGTTCAGAGCAGAAAGTCTGATGTATATAGCTATGGGGTTGTTTTGCTTGAGCTAATAACCAGAAAGAAAGTAATAATTCAATCTTTGAATAATGAGGCAGAGGTGACCACTTTAATACGTTGGGCTAGATCTGTATGGCTGGACACAGGAAAAATTGAGAAGATTGCTGATCCATATCTAGCAAGTGCATTCCCCAATTCAGTAGCACTAGCCAAGCAGGTCACTGCAGTGTTTTTGTTGGCATTACAATGCACAGAAAGGGAACCACATCAGAGACCGACCATGAAAGATGTTATTGGCTTTTATAAACGGAAAGTGTTCCAGTTGAGGTGTGATTATGTTGTTTATGGTGATGAAGTTGCTGTTGATGTAGCACCACAACCATGTGACTCTCTTAATCTCTTATCTGATGTTCCAGTTGTCAGTATTGACCACCATCTCCATGGTGAAAGTAGTAGTGCTGCAACCCTGAGACAAAGAGAAGTTACATTTAATGTTGGAATCCTTCCTTGGGATGATTGGAAACTCATGTCTAGACCTACAACCAGTATTGGTGGACTTGTCATTAAATCAATAGGCGGCAGTAAGATTCAGGCTGAAAAAATAATGGTAGCTGCTCTAATTGTTCCAAAAATAACCTATGCATGGTCTTGGTGGTTCTACTTTCCCTCCATCACTGGTCCAGTAGTTACCACAGCCTTCAATTGGTTTTTCCTCTCACGTTGGGTTCAATATATGCACCAGCAGAAATCATTGTATTCACAGCCCAAATCATACTTTATAAACACCAAATCCAGGCCACCCACCAACTCTGAGTAG | 3489 | 0.3981 | MTRTRSIAITLLLVISFLHIASALVSDDGVTLLSLLKSWTFVPSNISSSWNTSDSIPCSWVGVQCDHAHNVISLNLTHQGIFGQLGTEIGNLYHLQTLVLLGNGFSGKIPSELSNCSLLVYLDLSGNNFSGQIPYSFKKLQNLQYLSLSSNLLTGEIPDSLFQISSLEELSLHSNLLSGPVPTNIGNLTKLLRLYLYGNQLSGTIPSSIGNCSKLEDLELSFNRLTGEIPVTVWRIPSLKHILVHNNSLFGELPLEMTKLKHLKNISLFDNQFSGVIPQSLGINSSLVKLDCMNNKFTGNIPPNLCFGKQLIELNMGINQLQGGIPSDVGRCVTLRRLILKENNFTGSLPDFESNPNLIYMDISKNNISGPIPSSLGNCRNLTYINLSMNKFTGPIPSQFGKLVNLVILDLAHNNLEGTLPPQLSNCTKMDCFDVGFNFLNGSLPSNLSSWTGITTLILRENYFSGGIPDFLAKFNNLRELQFGGNLFGGKIPQSIGSLKNLFYGLNLSANGLTGDIPAEIRNLELLQSLDISLNNLTGKLDFLESLGSLIEVNISYNFFYGPVPETTGLMKALNSSPSSFMGNPLLCVSCLNCIKTSYVKPCVYISTDHKGISKIGIVMIELGSSVIISALLLIIIRMYLLGRYKQEFNEKWGIDSASDYPESFIERGGGRRIGFMYEREVNILAEKKPSALQDLVLKATKNLDDQYIVGIGAHGIVYKAQLGELVFAAKKVAFARNKQRCLSIMHKEIKVLGMFKHRNLITYADYWFGEDYGLILYEFMENGSLHDVLHEKKPPPALTWNDRFKIAVGIAEGLAYLHYDISPPIVHRDIKPKNILLDANMEPLIADFGTALYRNLSEDSNTYSGTRKMLSSNVAGTPGYIAPENAYAIVQSRKSDVYSYGVVLLELITRKKVIIQSLNNEAEVTTLIRWARSVWLDTGKIEKIADPYLASAFPNSVALAKQVTAVFLLALQCTEREPHQRPTMKDVIGFYKRKVFQLRCDYVVYGDEVAVDVAPQPCDSLNLLSDVPVVSIDHHLHGESSSAATLRQREVTFNVGILPWDDWKLMSRPTTSIGGLVIKSIGGSKIQAEKIMVAALIVPKITYAWSWWFYFPSITGPVVTTAFNWFFLSRWVQYMHQQKSLYSQPKSYFINTKSRPPTNSE. | 1163 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca8g00670 | 1162 | Pfam | Leucine rich repeat N-terminal domain | 26 | 66 | IPR013210 | - | |
Seca8g00670 | 1162 | PANTHER | RECEPTOR KINASE-LIKE PROTEIN XA21 | 330 | 987 | - | - | |
Seca8g00670 | 1162 | ProSiteProfiles | Leucine-rich repeat profile. | 142 | 164 | IPR001611 | GO:0005515 | |
Seca8g00670 | 1162 | Gene3D | Ribonuclease Inhibitor | 333 | 598 | IPR032675 | - | |
Seca8g00670 | 1162 | SMART | LRR_typ_2 | 188 | 212 | IPR003591 | - | |
Seca8g00670 | 1162 | SMART | LRR_typ_2 | 140 | 164 | IPR003591 | - | |
Seca8g00670 | 1162 | SMART | LRR_typ_2 | 403 | 427 | IPR003591 | - | |
Seca8g00670 | 1162 | SMART | LRR_sd22_2 | 188 | 220 | - | - | |
Seca8g00670 | 1162 | SMART | LRR_sd22_2 | 140 | 172 | - | - | |
Seca8g00670 | 1162 | SMART | LRR_sd22_2 | 403 | 429 | - | - | |
Seca8g00670 | 1162 | FunFam | Leucine-rich repeat receptor-like protein kinase PEPR1 | 309 | 597 | - | - | |
Seca8g00670 | 1162 | FunFam | Leucine-rich repeat receptor-like protein kinase PEPR1 | 24 | 183 | - | - | |
Seca8g00670 | 1162 | SUPERFAMILY | RNI-like | 266 | 570 | - | - | |
Seca8g00670 | 1162 | SUPERFAMILY | L domain-like | 47 | 370 | - | - | |
Seca8g00670 | 1162 | ProSiteProfiles | Protein kinase domain profile. | 704 | 997 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca8g00670 | 1162 | Pfam | Leucine rich repeat | 356 | 416 | IPR001611 | GO:0005515 | |
Seca8g00670 | 1162 | Pfam | Leucine rich repeat | 135 | 177 | IPR001611 | GO:0005515 | |
Seca8g00670 | 1162 | Gene3D | Ribonuclease Inhibitor | 233 | 332 | IPR032675 | - | |
Seca8g00670 | 1162 | Gene3D | Phosphorylase Kinase; domain 1 | 686 | 780 | - | - | |
Seca8g00670 | 1162 | SMART | serkin_6 | 704 | 997 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca8g00670 | 1162 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 826 | 838 | IPR008271 | GO:0004672|GO:0006468 | |
Seca8g00670 | 1162 | ProSitePatterns | Protein kinases ATP-binding region signature. | 710 | 732 | IPR017441 | GO:0005524 | |
Seca8g00670 | 1162 | Gene3D | Ribonuclease Inhibitor | 182 | 232 | IPR032675 | - | |
Seca8g00670 | 1162 | FunFam | Leucine-rich repeat receptor-like protein kinase PXL1 | 185 | 281 | - | - | |
Seca8g00670 | 1162 | FunFam | Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 | 781 | 995 | - | - | |
Seca8g00670 | 1162 | Gene3D | Ribonuclease Inhibitor | 26 | 181 | IPR032675 | - | |
Seca8g00670 | 1162 | Pfam | Protein kinase domain | 709 | 988 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca8g00670 | 1162 | SUPERFAMILY | Protein kinase-like (PK-like) | 694 | 989 | IPR011009 | - | |
Seca8g00670 | 1162 | Gene3D | Transferase(Phosphotransferase) domain 1 | 781 | 1000 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca8g00670 | Seca-Chr8 | 8224665 | 8228715 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca8g00670 | 68 | 989 | Receptor kinase-like Gene Family | AT1G73080 | 44.468 | 0.0 | 725 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Seca8g00670 | Pkinase | 2.4e-39 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca8g00670 | - | - | tpra:123924637 | 1571.21 |