Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g00619 ATGGAGGTTTTGAACACCAGAAAAATGGTGTTAATTATGATGTCAATGATTATGATGATAATGATGGCAAAATCTGAGCTTCACTACGTTGGAGGAGGAAAGATTAGTTGGGCACCCAATGTTAACTTGACACAATGGTCATCCCATGAGCACTTTCATGTGGACGATTGGTTATATTTTGGATATGATAGGCACATATACAGTGTGTTGGAGGTGAACAAGACTAGCTATGAAAATTGCATAGACACAGGATTTATTAAGAACATAACAAGGGGTGGAGGAAGAGACGTGTTTCAGTTGACAAAGGCTAAGACCTATTACTTCCTAAGTGGAGGAGGTTTCTGTTGGCAAGGGATGAAGGTTGCTATACATGTTACTGATGCTGAAGTTGCTGATGTACCTGTTCCAGCTCCACTAATAAAAAGTGGTTCTTCTGCTTCAGATTCTTGTGGCATTAAGGTCAACCACACACTTGTGGTGCTCATCTTAGTCTTGATGTGGACCATACTCTTCAAATAA 519 0.4008 MEVLNTRKMVLIMMSMIMMIMMAKSELHYVGGGKISWAPNVNLTQWSSHEHFHVDDWLYFGYDRHIYSVLEVNKTSYENCIDTGFIKNITRGGGRDVFQLTKAKTYYFLSGGGFCWQGMKVAIHVTDAEVADVPVPAPLIKSGSSASDSCGIKVNHTLVVLILVLMWTILFK. 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g00619 172 SUPERFAMILY Cupredoxins 27 126 IPR008972 -
Seca8g00619 172 Pfam Plastocyanin-like domain 37 119 IPR003245 GO:0009055
Seca8g00619 172 FunFam Lamin-like protein 24 128 - -
Seca8g00619 172 ProSiteProfiles Phytocyanin domain profile. 26 127 IPR003245 GO:0009055
Seca8g00619 172 Gene3D - 25 131 IPR008972 -
Seca8g00619 172 PANTHER BLUE COPPER PROTEIN 22 132 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g00619 Seca-Chr8 7550300 7551898 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g00619 9 165 Phytocyanin Superfamily AT2G27035 40.506 2.96e-42 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g00619 - - gmx:100812113 217.238