Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g00608 ATGTCGACAGGAGGTGATGAGCGCTCAGCGAATTCCATGGGTGAGGATCCAGTGCTGGATCAGTTCATGGAGGCTTACTGTGAGATGCTCATCAAGTATGAGCAACAACTCTCTAAACCCTTCCACCAAGCCATGCTCTTTCTTCAAAGGATCGACTCCCACTAA 165 0.4909 MSTGGDERSANSMGEDPVLDQFMEAYCEMLIKYEQQLSKPFHQAMLFLQRIDSH. 55
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g00608 54 Pfam KNOX2 domain 12 53 IPR005541 GO:0003677|GO:0005634
Seca8g00608 54 SMART KNOX2_2 9 54 IPR005541 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g00608 Seca-Chr8 7375522 7375686 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g00608 13 52 Homeobox Transcription Factor Family AT1G62360 77.500 3.11e-18 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g00608 - - egu:105049401 78.1814