Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca8g00606 | ATGGGAAACTCATGCACAAAACCAGTTGCTCATATGTCTTCCACAAGTTTTTTTGGAAGTACAAAATCTCAAAATAAGACAAAGCAGAATTCAAATTCTCCTGAAGGAAAAGCTTCAGCAACAAATGTTGACATATCCATCTCCAGTAATGTTAAGTCCTTCACCTTCAATGATCTAAAGGAGGCCACCAAGAACTTCCGGCAAGAAAATTTAATTGGGGAGGGAGGTTTTGGGTTTGTCTACAAGGGATGGATAGATGAGAACACTGGTGCTCCCACAAGACCAGGAACTGGGATTGTAGTGGCCATTAAGAAGCTTAAGCCAGAAAGCTTTCAAGGCCACAAGGAATGGCTTGCAGAAGTCAATTATCTAGGCCAACATCACCATGAAAATTTGGTGAAACTTATTGGTTACTGCTCAGAAGGTAACAACAGGCTTCTAGTTTATGAGTTTATGCAGAAAGGAAGTTTGGAAAATCATTTATTTAGAATGGCAGAAGGTGTTGAACCAATTTCCTGGATTACGCGGATCAATATAGCAATTGCAGTTGCAAAAGGACTAGCATTCTTACATTCCCTTGATAAAAATGTTATCTATCGCGATTTAAAGGCTTCCAACATCCTACTTGATTCGGATTTCAATGCAAAGCTTTCGGATTTTGGCTTGGCAAGAGATGGTCCTACTGGAGATAACACTCATGTTTCAACCAGAGTCATTGGAACTCATGGTTATGCTGCACCAGAGTATGTAGCTACAGGACATTTGACCTCGAGGAGTGATGTATACAGCTTTGGTGTTGTCTTGTTAGAGTTACTAACAGGAAGGCGTGTAGTTGAAGATGACAGACCTGGATTTTCAGATGAAACATTGGTAGATTGGGCAAGACCCTTCCTGAATGACAGTAGAAGAATTTTGAGAATCATGGATACCAGGTTGGGTGGACAATACTCCAAGAGAGGAGCCCAAGCTGCAGCTGCACTTGTACTGCAATGTCTAAATAGTGACCCCAAATATAGACCACCGATGGTGAATGTTCTAGCTGCATTGGAAGCACTACATTCCTCAAATTCAATCCCAAGGACCCCAAAATCTGGTACTGAGAATCATGCTACCAAGCATTCTAATCATTCCCATAAGTCAGTTGGCAATACTAACAAACTATGA | 1164 | 0.4107 | MGNSCTKPVAHMSSTSFFGSTKSQNKTKQNSNSPEGKASATNVDISISSNVKSFTFNDLKEATKNFRQENLIGEGGFGFVYKGWIDENTGAPTRPGTGIVVAIKKLKPESFQGHKEWLAEVNYLGQHHHENLVKLIGYCSEGNNRLLVYEFMQKGSLENHLFRMAEGVEPISWITRINIAIAVAKGLAFLHSLDKNVIYRDLKASNILLDSDFNAKLSDFGLARDGPTGDNTHVSTRVIGTHGYAAPEYVATGHLTSRSDVYSFGVVLLELLTGRRVVEDDRPGFSDETLVDWARPFLNDSRRILRIMDTRLGGQYSKRGAQAAAALVLQCLNSDPKYRPPMVNVLAALEALHSSNSIPRTPKSGTENHATKHSNHSHKSVGNTNKL. | 388 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca8g00606 | 387 | MobiDBLite | consensus disorder prediction | 16 | 41 | - | - | |
Seca8g00606 | 387 | ProSiteProfiles | Protein kinase domain profile. | 66 | 352 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca8g00606 | 387 | PANTHER | OS01G0588500 PROTEIN-RELATED | 27 | 353 | - | - | |
Seca8g00606 | 387 | Gene3D | Transferase(Phosphotransferase) domain 1 | 152 | 376 | - | - | |
Seca8g00606 | 387 | Pfam | Protein tyrosine and serine/threonine kinase | 69 | 347 | IPR001245 | GO:0004672|GO:0006468 | |
Seca8g00606 | 387 | Gene3D | Phosphorylase Kinase; domain 1 | 40 | 151 | - | - | |
Seca8g00606 | 387 | CDD | STKc_IRAK | 72 | 352 | - | - | |
Seca8g00606 | 387 | MobiDBLite | consensus disorder prediction | 356 | 387 | - | - | |
Seca8g00606 | 387 | SUPERFAMILY | Protein kinase-like (PK-like) | 37 | 349 | IPR011009 | - | |
Seca8g00606 | 387 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 197 | 209 | IPR008271 | GO:0004672|GO:0006468 | |
Seca8g00606 | 387 | FunFam | protein STRUBBELIG-RECEPTOR FAMILY 8 | 152 | 363 | - | - | |
Seca8g00606 | 387 | ProSitePatterns | Protein kinases ATP-binding region signature. | 72 | 105 | IPR017441 | GO:0005524 | |
Seca8g00606 | 387 | FunFam | Serine/threonine-protein kinase BIK1 | 32 | 151 | - | - | |
Seca8g00606 | 387 | SMART | serkin_6 | 66 | 352 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca8g00606 | Seca-Chr8 | 7299860 | 7304033 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca8g00606 | 28 | 349 | Glycoside Hydrolase | AT3G07070 | 49.845 | 8.97e-107 | 318 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIa-2 | Seca8g00606 | PK_Tyr_Ser-Thr | 1e-46 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca8g00606 | - | - | gmx:102664409 | 668.307 |