Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g00595 ATGAGGAAGAAACTTGATACTCGTTTTCCTGCTGCTAGGATTAAGAAAATTATGCAAGCTGATGAGGATGTAGGGAAGATTGCGATGGCTGTGCCTCTTCTAGTTTCATGTAATAAGTTATCTCTGATTAATGATACTGTTTATGTATTGGCAGCTAAAGCACTAGAACTATTTCTGCAAGATTTGTGTGATCGAACATATGAGATAACACTTACGAGGGGAGCAAAGACCATGAATGCTTTTCATTTAAAACAGTGTGTGCAGACTTTTAATGTCTTTGATTTTCTGAAAGATATTGTGAGTAAGGTTCCTGATTTAGGTGGTTCTGTTGCAACTGGTGATGATCGTTCTGTCACTAAGAGGAGGAAAGTTGCTGAAGATGATGATAATGACAGCGACGAGGAGACCAAGAGAAATAAAATGCCAGAACCTGGACATACGAGTGGCAGAGGAAGGGGTAGGGGCAGAGGTAGGGGTCGTGGCCGTGGAAATAGAACGGTCGATCAAGAGATGACATCACATGTCAAGTTTGAAGATGATTCTGATGTGTTGAAGCAAAATGACAAACACACTCAAAGCAATGAAAGCCTAGAAAATGTATCAGAACATGAAGAAGTCAAGCAGAGTTTTCCAGTTAGCAAACCAGCTGAAGTGGCCATTCGACATTTTGACTTAAATATGGACCCAGATGAGAACATGGATTTGGTATCCCCACCAGCTCCTGTCCCAACTAGTTCATCTGCAAAATCAATATTAGAAGAGAAGCATGAGGAATACCCTGGATGGTCCTTGTCTGATGTGGAAAAATTGGCCATTGATCCCATGCAACTGGCCAGCTTAAATAAAAGGATTGATGAAGATGAGGAGGATTATGATGAAGAAATTTAG 888 0.4077 MRKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSCNKLSLINDTVYVLAAKALELFLQDLCDRTYEITLTRGAKTMNAFHLKQCVQTFNVFDFLKDIVSKVPDLGGSVATGDDRSVTKRRKVAEDDDNDSDEETKRNKMPEPGHTSGRGRGRGRGRGRGRGNRTVDQEMTSHVKFEDDSDVLKQNDKHTQSNESLENVSEHEEVKQSFPVSKPAEVAIRHFDLNMDPDENMDLVSPPAPVPTSSSAKSILEEKHEEYPGWSLSDVEKLAIDPMQLASLNKRIDEDEEDYDEEI. 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g00595 295 MobiDBLite consensus disorder prediction 161 210 - -
Seca8g00595 295 SUPERFAMILY Histone-fold 4 104 IPR009072 GO:0046982
Seca8g00595 295 Coils Coil 277 295 - -
Seca8g00595 295 MobiDBLite consensus disorder prediction 108 211 - -
Seca8g00595 295 Gene3D Histone, subunit A 1 88 IPR009072 GO:0046982
Seca8g00595 295 MobiDBLite consensus disorder prediction 115 150 - -
Seca8g00595 295 FunFam dr1-associated corepressor homolog 1 102 - -
Seca8g00595 295 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 7 139 - -
Seca8g00595 295 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 8 35 IPR003958 -
Seca8g00595 295 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 43 87 IPR003958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g00595 Seca-Chr8 7194771 7198886 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g00595 1 284 CCAAT-HAP5 Transcription Factor Family AT3G12480 43.974 1.73e-62 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g00595 K21752 - gmx:100814800 424.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g00595 8 7194771 7198886 Seca8g00595 8 7194771 7198886 ECH