Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g00561 ATGGAACAGAGAAGAGGAAGAAGCTCTTCATCATGTCTTCTCTTCTCAACTCTCCTTTGTCTTCTTCTCTTCTGTTTCTTGGGATCAGTTGAGGCTTACAAGAATTACACAGTGGGAGATTCTTTAGGTTGGTTTGACAATACCATGAAGCCTAATGTCAATTATCAGAAGTGGGTTGCCAATAAAGAGTTCACCTTGGGAGATTTCCTTATTTTCAACACAGACACTAACCACTCTGTTGTTCAGACATACAATTTCACCACATACAAACTATGTGACTATGATGATGCACTAGACAATGACACAATCCAATGGTCAGCATCTGATCCTTCCAATACTGAGACACACCCTGTGACAGTAGCAGTTCCTTTGGTAAAAGAAGGGATGACATACTTTTTCTCAAGTGATTATGATGGTGACCAATGCAAGAGTGGCCAACATTTCAAAATAAATGTGACTCATGGACAAGGGTTGCCAAAGAGTCTTCAAAATCCCACCACAGAAGAGTCTCCTTCTCCTACTAGTCCAGTTGCTGGAGATGATGAATCAGCACCAGACACAATTGTTCCTTCCAATTTCAGCCATCCCCGGGAAGAAAGTGATGATGATGAGAAAGATAGTGACAAAGGAAAACAGAAATCTAGTTCTGTTTCAATGTCAATGTATAAACAACTTCACAACAAAGTGTGTGGGTCTTTTATCTTGTTAGGATTAGTTTTCTTGTTTTAG 729 0.3978 MEQRRGRSSSSCLLFSTLLCLLLFCFLGSVEAYKNYTVGDSLGWFDNTMKPNVNYQKWVANKEFTLGDFLIFNTDTNHSVVQTYNFTTYKLCDYDDALDNDTIQWSASDPSNTETHPVTVAVPLVKEGMTYFFSSDYDGDQCKSGQHFKINVTHGQGLPKSLQNPTTEESPSPTSPVAGDDESAPDTIVPSNFSHPREESDDDEKDSDKGKQKSSSVSMSMYKQLHNKVCGSFILLGLVFLF. 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g00561 242 MobiDBLite consensus disorder prediction 155 177 - -
Seca8g00561 242 MobiDBLite consensus disorder prediction 195 212 - -
Seca8g00561 242 PANTHER BLUE COPPER PROTEIN 33 183 IPR039391 GO:0009055
Seca8g00561 242 CDD Phytocyanin 34 152 - -
Seca8g00561 242 Pfam Plastocyanin-like domain 47 146 IPR003245 GO:0009055
Seca8g00561 242 SUPERFAMILY Cupredoxins 34 152 IPR008972 -
Seca8g00561 242 MobiDBLite consensus disorder prediction 155 217 - -
Seca8g00561 242 ProSiteProfiles Phytocyanin domain profile. 34 154 IPR003245 GO:0009055
Seca8g00561 242 FunFam Early nodulin-like protein 18 33 155 - -
Seca8g00561 242 Gene3D - 33 157 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g00561 Seca-Chr8 6648262 6650845 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g00561 8 206 Phytocyanin Superfamily AT1G08500 60.697 5.79e-83 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g00561 - - gmx:100526961 341.658