Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g00464 ATGTGTATTGGAAAAGGAGAATTCAAAGTGAGTGTAACTAAAGAGGAGGTGGTGGCGGCAGTGCTGCCACTGCAACACCACTGGCTGCCACTCTCTAACCTTGATCTCCTTCTTCCCCCTTTGGACGTCAGCGTTTTCTTTTGCTACAACAACAACAACACATTCAGCTTTGGATCCATGGTGGGGACTCTGAAAAGTGCTTTAGCTGAGGCTCTTGTTTCCTATTACGCCTTTGCTGGTGAAGTGGTGGCTAACTCCATGGGTGAACCAGAGCTACTTTGCAATAACCGTGGGGTGGAGTTTGTGGAAGCAGTGGCTGATGTTGAGTTAGAGTCCCTTAATCTCTACAATCCAGATGACACCGTTGAAGGGAAACTTGTCCCAACAAAGAAGCATGGTGTGCTTGCTGTTCAGGCAACTCGGCTCAAGTGTGGTGGGTTAGTAGTGGCATGCACTTTTGACCATCGCATGGCAGATGCCTACTCAGCAAACATGTTCCTTGTATCATGGGCCGAGATAGCCCAGCCCAACAAGCCCACAACCTCAACGCAACCCTGTTTCCGACGGTCCCTTCTCATCCCACGACGCCCACTTTCCATTGACCCTTCACTCCATCACATGTATGTACCCATCTCTGAGTTCACACCCCCACCCGAATCTGGATTTGAATCCAACCCAATTGTGAGCCGCATTTATTACATTACAAGCGAACAACTCAATTGCTTACAATCACTAGCTAACTCAAATGGCACTAAACGCACAAAACTCGAGTCTTTCTCTGCATTCTTGTGGAAAATGGTTGCCACAGCTGCTGTCAAAATTGATGGTAAAAAAGGGGTTGTTTCCAAGATGGGCATGGTTGTTGATGGAAGGAAGAGGCTCAACAAAGAAGGATTAATTATGGATTCATATTTTGGGAACGTGCTTTCGATTCCATATGGTGGGAAATCATTGGAGGAGCTTGTTGAAAAGCCGATAAGCTGGGTGGCGGAGCAAGTTCATGAGTTCTTGGAAACGGCGGTGACAAAGGAACATTTTTTAGGGTTGATTGATTGGGTGGAAGCACATCGCCCTGTGCCTGGGTTGTCTAAGATTTATTGTGTCAATGCTAAGGAAGAGGGACCGGCTTTTGTGGTTTCTTCAGGGCAAAGGTTTCCAGAGTCAAAGGTGGATTTTGGATGGGGAAAGCCTGTTTTTGCATCCTACCATTTTCCTTGGGGTGGAGATTGTGGCTATGTAATGCCAATGCCTAGTCCTAAAGGGAATGGTGATTGGTTGGTCTACATGCACCTTCGAAAAGGTCACTTGCACTTCATAGAGTCTCGAGCTTCCCATTTCTTTAGGCCCTTCTCTTGGGATTGTGTCCTAAATTAA 1374 0.468 MCIGKGEFKVSVTKEEVVAAVLPLQHHWLPLSNLDLLLPPLDVSVFFCYNNNNTFSFGSMVGTLKSALAEALVSYYAFAGEVVANSMGEPELLCNNRGVEFVEAVADVELESLNLYNPDDTVEGKLVPTKKHGVLAVQATRLKCGGLVVACTFDHRMADAYSANMFLVSWAEIAQPNKPTTSTQPCFRRSLLIPRRPLSIDPSLHHMYVPISEFTPPPESGFESNPIVSRIYYITSEQLNCLQSLANSNGTKRTKLESFSAFLWKMVATAAVKIDGKKGVVSKMGMVVDGRKRLNKEGLIMDSYFGNVLSIPYGGKSLEELVEKPISWVAEQVHEFLETAVTKEHFLGLIDWVEAHRPVPGLSKIYCVNAKEEGPAFVVSSGQRFPESKVDFGWGKPVFASYHFPWGGDCGYVMPMPSPKGNGDWLVYMHLRKGHLHFIESRASHFFRPFSWDCVLN. 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g00464 457 Gene3D - 212 441 IPR023213 -
Seca8g00464 457 Pfam Transferase family 8 445 - -
Seca8g00464 457 Gene3D - 5 210 IPR023213 -
Seca8g00464 457 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 23 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g00464 Seca-Chr8 5427864 5430184 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g00464 9 440 Monolignol Biosynthesis Gene Families AT5G48930 27.679 2.54e-37 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g00464 - - gmx:100809201 679.093