Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g00463 ATGTGTGTTGGAAAAGGAGAATTCACTGTGAATGTGACCAAGGAAGAGGTGGTGGCAGCAGTGCTGCCAATGCAAGACCACTGGCTGCCACTCTCTAACCTTGACTTAATTCTTCCCCCTGTGGATGTTGGAGTATTCTTTTGCTACAAAAACAACACATTAAGCTTTGGATCCATGGTGGGGACTCTGAAAAGTGCTTTAGCTGAGGCTCTGGTTTCCTATTATGCATTTGCTGGTGAAGTGGTGGCTAATTCCATGGGTGAACCAGAGCTACTTTGCAATAACCGTGGAGTAGATTTTGTGGAAGCAGAGGCTGATGTTGAGTTAGAGTCCCTTAATCTCTACAATCCAGATGACGCCATTGAAGGGAAACTTGTCCCAACCAAGAAGCATGGTGTGCTTGCTGTTCAGGCAACTTGGCTGAAGTGTGGCGGATTAGTAGTGGCATGCTCTTTTGACCATCGCATCGCTGATGCCTACTCTGCAAACATGTTCCTTGTATCATGGGCCGAGATAGCCCAACCCAACAAGCCCATTACCTCAACACAACCTTGCTTTCGACGCTCCCTTCTCATCCCAAGACACCCCCTTTCCATTCACCCTTCACTCCATCACATGTATGCCCCCATCTCCTCCCTCCCTCCCCCACCTAAATTCGAATCCAAATCTGACCCAATCATTAGTCGCATATACTATGTCACAAGTGAGCAACTCAAGAGCATGCAATCATTAGCTAACTCAAACGGTGCGAATCGGACAAAACTCGAGTCCTTCTCCGCATTCTTGTGGAAGATGGTCGCTGCAGCTACTGCTAGCAGTGATGGTAAGAAAAAGTTTGTTGCAAAGATGGGCTTGGTGGTTGATGGAAGGAAGAGGCTTAGTGATGGTGACAAGAACAAAGAAGCAATTATGAGTGTGTATTTTGGGAATGTTCTTTCCATTCCTTATGGAGGGAAAAAAACAGAGGAGCTCGTGGAAAAGCCATTAAGTTGGGTGGCAGAGCAAGTTCATGAGTTCTTAGAAACAGCAGTGACAAAAGAGCATTTCTTGGGGCTAATTGATTGGGTGGAAGCACATCGACCAGTGCCTGGGTTAGCAAGGATTTATTGTGGTAGCACTGAGGAAGAGGGACCGGCTTTTGTGGTTTCTTCAGGACAGAGGTTTCCGGGGTCAAAGGTTGACTTTGGATGGGGGAAGCCAGTGTTTGCGTCCTACCATTTTCCTTGGGGTGGAGATGCTGGTTATGTTATGCCAATGCCTAGTCCTAAAGGTAATGGTGATTGGGTGGTCTACATGCACCTTCCACAAGGCCACTTGCATTTCATGGAGTCTCAGGCACCACAATTCTTTAGGCCCATCTCTTGGGATTATCTACTAAATTAA 1383 0.4685 MCVGKGEFTVNVTKEEVVAAVLPMQDHWLPLSNLDLILPPVDVGVFFCYKNNTLSFGSMVGTLKSALAEALVSYYAFAGEVVANSMGEPELLCNNRGVDFVEAEADVELESLNLYNPDDAIEGKLVPTKKHGVLAVQATWLKCGGLVVACSFDHRIADAYSANMFLVSWAEIAQPNKPITSTQPCFRRSLLIPRHPLSIHPSLHHMYAPISSLPPPPKFESKSDPIISRIYYVTSEQLKSMQSLANSNGANRTKLESFSAFLWKMVAAATASSDGKKKFVAKMGLVVDGRKRLSDGDKNKEAIMSVYFGNVLSIPYGGKKTEELVEKPLSWVAEQVHEFLETAVTKEHFLGLIDWVEAHRPVPGLARIYCGSTEEEGPAFVVSSGQRFPGSKVDFGWGKPVFASYHFPWGGDAGYVMPMPSPKGNGDWVVYMHLPQGHLHFMESQAPQFFRPISWDYLLN. 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g00463 460 Pfam Transferase family 9 445 - -
Seca8g00463 460 Gene3D - 211 445 IPR023213 -
Seca8g00463 460 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 23 421 - -
Seca8g00463 460 Gene3D - 5 209 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g00463 Seca-Chr8 5413222 5415382 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g00463 10 443 Monolignol Biosynthesis Gene Families AT5G48930 26.726 4.50e-39 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g00463 - - gmx:100809201 712.22