Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g00461 ATGGTAGTGAAGTTGTTTGGCCCCCACTGTGCTTCATCCAAACGGGTCTTACTTTGTCTGGTTGAGAAGGAAATAGAATTTGAGGTTGTCCCTGTTGATGTCAGGAAGGGGGAACACAAGGATCCTGAGTACCTCAAATTACAGCCCTTTGGAGTTGTTCCTGTGGTTAAAGATGGAGATTATACCTTATTTGAATCTCGGGCTATAATGAGGTTTTATGCAGAAAAATATAGGTCCCAAGGGGTTGAGTTGCTGGGAAAGACAATAGAAGAGAGGGGTCTTGTGGAACAATGGTTAGAAGTTGAAGCACAAAACTTTCACCCACTAGTCTACAACTTGTCCATTCATATTTTGTTCGCTCCAATAGTTGGTATCACTCCTGATCCAAAGGTGATTGAAGAGAGTGAAGCAAAGTTGGGGAAGGTTTTGGATGTTTATGAGGAGAGGCTATCAAAGAGCAAGTATTTGGCTGGGGATTTCTTTAGCCTTGCTGAGATTAGCCACATTCCTTTTATTGATTATATTGTGAACAATATGGAGAAAGGTTACTTGATAAAGGATAGGAAAAATGTGAGTGCTTGGTGGGATGACATATGCAATAGACCATCATGGAAGAGGGTTCTCCAGTTATACAGAGCTCCAATCTAG 648 0.4151 MVVKLFGPHCASSKRVLLCLVEKEIEFEVVPVDVRKGEHKDPEYLKLQPFGVVPVVKDGDYTLFESRAIMRFYAEKYRSQGVELLGKTIEERGLVEQWLEVEAQNFHPLVYNLSIHILFAPIVGITPDPKVIEESEAKLGKVLDVYEERLSKSKYLAGDFFSLAEISHIPFIDYIVNNMEKGYLIKDRKNVSAWWDDICNRPSWKRVLQLYRAPI. 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g00461 215 FunFam Glutathione S-transferase F2 86 208 - -
Seca8g00461 215 CDD GST_N_Phi 2 76 - -
Seca8g00461 215 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 81 IPR004045 -
Seca8g00461 215 FunFam Glutathione S-transferase F2 2 85 - -
Seca8g00461 215 Gene3D Glutaredoxin 1 85 - -
Seca8g00461 215 CDD GST_C_Phi 90 208 IPR034347 -
Seca8g00461 215 SUPERFAMILY GST C-terminal domain-like 84 207 IPR036282 -
Seca8g00461 215 Pfam Glutathione S-transferase, N-terminal domain 3 72 IPR004045 -
Seca8g00461 215 Gene3D - 86 208 - -
Seca8g00461 215 Pfam Glutathione S-transferase, C-terminal domain 115 202 IPR004046 -
Seca8g00461 215 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 215 IPR010987 -
Seca8g00461 215 PANTHER GLUTATHIONE S-TRANSFERASE RHO 2 209 - -
Seca8g00461 215 SFLD Glutathione Transferase (cytosolic) 3 201 IPR040079 -
Seca8g00461 215 SFLD Main (cytGST) 3 201 - -
Seca8g00461 215 SUPERFAMILY Thioredoxin-like 8 81 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g00461 Seca-Chr8 5382278 5383432 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g00461 1 215 Glutathione S-transferase Gene Family AT2G30870 59.535 2.09e-94 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g00461 K00799 - gmx:100819783 371.318