Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g00424 ATGGCTTGTATCCATTTTTATGTTGGGCTCTATAACATGATATATTGGAATCCAAAAATAGTCTGTGCTATCTCCCCACACTATATCATCAAGTTCTTTATCAAGACTGGCAAAGAAGGCTGGATTTCTCTTGGAGGGATACTTCTCTGTACTACTGGAGCTGAAGCTATGTTTGTGGATCTTGGTTTCAAGTTGCAATTCCTTTTCTCTTTTATGAGTTCCTCTCTTGGTTTCAAGTTGGTATTGGTTGATACCAAATACCGACTTGCAGGAGGGTATTAG 282 0.3901 MACIHFYVGLYNMIYWNPKIVCAISPHYIIKFFIKTGKEGWISLGGILLCTTGAEAMFVDLGFKLQFLFSFMSSSLGFKLVLVDTKYRLAGGY. 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g00424 93 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 6 63 IPR003855 GO:0015079|GO:0016020|GO:0071805
Seca8g00424 93 Pfam K+ potassium transporter 6 62 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g00424 Seca-Chr8 4891389 4891670 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g00424 6 82 Inorganic Solute Cotransporters AT3G02050 55.844 4.98e-23 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g00424 K03549 - gmx:100776888 103.99