Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g00417 ATGGATGAGGAAAACACACAAACACACAGAATCATACCCACATTTCATAGAAAACCAGAGGAACCCAACCAAAATTCTTCAATGGACACTCACAAGTCTTTGCATGTCTTCAGGAGAAGCAGGAGGCGGTGGAGAAAAGAGGTGGTAAAGGAAGTGACAGTGAAAGAGGATGTGAAGGGTACTATTTGTGTTGTTGATGACAAAGAAAAAGAAAAAGAAGAAGAAGAGGAGGAGGATGATAGGGAAGAGATAGAGAGGAAGATTCATGCATTGCAGAGGATTGTGCCTGGTGGAGAGACTTTAGGTGTGGACAAGCTGTTTGATGAAACTGCAGGGTATATTGTGTCCTTGCAGTACCAAGTCAAAGCATTGAGGACTCTTGCTGGTTTCTTTGAGAAGTTGGACAAGGAAAAGACAAAGTTTGGAGGTTGA 432 0.4259 MDEENTQTHRIIPTFHRKPEEPNQNSSMDTHKSLHVFRRSRRRWRKEVVKEVTVKEDVKGTICVVDDKEKEKEEEEEEDDREEIERKIHALQRIVPGGETLGVDKLFDETAGYIVSLQYQVKALRTLAGFFEKLDKEKTKFGG. 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g00417 143 MobiDBLite consensus disorder prediction 1 34 - -
Seca8g00417 143 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 27 131 IPR044660 GO:0006355
Seca8g00417 143 MobiDBLite consensus disorder prediction 1 25 - -
Seca8g00417 143 CDD bHLH_AtIBH1_like 86 128 IPR044549 GO:0006355
Seca8g00417 143 Coils Coil 58 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g00417 Seca-Chr8 4797286 4797717 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g00417 81 141 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G21330 42.623 1.31e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g00417 - - gmx:100817215 145.976