Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g00412 ATGTCTGTGGATATTATCTATTTTCTTTCATGGGGTCTGTTTCCCCTGCTTGCACTTGCCTCTTTCAGTTTCTTGAGGCACAAACAATGTTGTAACAAAGACAAAAGAAAGCTGCCACCAGGGGAAATGGGGTTTCCTTTGATTGGGGAGACAATGGAATTCTTCAATGCTCAAAGGAGGAACCATTTATTTGAAGATTTTGTTCATCCTAGAATTCTCAAACATGGGAACATCTTCAAAACAAGGATAATGGGGTCTCCAACTGTGGTTGTAAATGGAGCTGAAGCCAATAAGTTTCTTTTGTCTAATGAGTTCAAGTTGGTGAAAAGCTCTTGGCCTTGTTCCTCAGTTCAGCTCATGGGAAGGGACTCAATCATGGAGAAAGATGGGGACAGGCACAAGTTCCTACGCAGTGTTATTGGCACTAGCCTTGGATATGCTGGACTTGAAGTACTAGTTCCAAAATTGTGCAATTCTGTGAAGTTGCATTTAGCTACAAACTGGAAAGGCCAAGAAAAGATTAGTCTTTACCGTTCAACAAAAGTCCTGACATTTAGCATAGTGTTTGAGTGCTTGTTGGGGATCAATGTGGAGCCAGGTATGCTAGATACATTTGAAAGAGTGTTGGAAGGAGTGTTTTCTCCAGCAATTCAGTTTCCAGGTTCTAAATTTTGGAGAGCAATGAAAGCTAGGCAGGAGATAGAGAAGATGTTGGTTAAAATGGTGAGAGAGAAGAGAAAGGAAATGGAAGGAAACTTGCAAAGACAACAAGAAGGTGATGGTGGAATGCTTCTGTCTAAATTGGTATCTGGGATGATCCAAGGGGAGATCACTGAAAAAGAGGTCATAGACAATGTGGTGCTGCTAGTTTTTGCAGCTCATGATACTACTTCTTTTGCTGTTGCTATGACATTCAAGATGCTGGCTCAGCATCCTGATTGCTATGGTAAACTTCTTCAAGAACATGTTGATATAATGAGCAAAAAAAGATGGGGTGAGAATCTCAGTGTAGAGGATGTAAAGAAGATGAAGTATACCTGGCAAGTTGCTAGAGAAAGCATGAGATTGTTCCCTCCTATCTTTGGCTCTTTTAGGAAAGCAATTACTGATATTGAATATGAAGGATTCACTATACCTAGTGGATGGAAGGTGCTATGGACAACATATGGGACACATTATAATGAAAACTATTTTAAAGATCCTCTGAGTTTCAATCCAAGTAGGTTTGAGGAGGGAATACCCCAATATGTATTTGTTCCATTTGGAGGAGGGCCAAGAGTTTGTGCAGGGTACCAATTAGCAAAGTTAAATATTCTCATCTTTGTGTATTATGTTGTGACCCAATATGAGTGGTTCTTACTCCATCCAGATGAGTCAGTCACCATGGATCCCCTGCCCTTCCCTTCCCTTGGAATGCCTATTAGAATTTCTCCTAAGTATTCATGA 1446 0.4053 MSVDIIYFLSWGLFPLLALASFSFLRHKQCCNKDKRKLPPGEMGFPLIGETMEFFNAQRRNHLFEDFVHPRILKHGNIFKTRIMGSPTVVVNGAEANKFLLSNEFKLVKSSWPCSSVQLMGRDSIMEKDGDRHKFLRSVIGTSLGYAGLEVLVPKLCNSVKLHLATNWKGQEKISLYRSTKVLTFSIVFECLLGINVEPGMLDTFERVLEGVFSPAIQFPGSKFWRAMKARQEIEKMLVKMVREKRKEMEGNLQRQQEGDGGMLLSKLVSGMIQGEITEKEVIDNVVLLVFAAHDTTSFAVAMTFKMLAQHPDCYGKLLQEHVDIMSKKRWGENLSVEDVKKMKYTWQVARESMRLFPPIFGSFRKAITDIEYEGFTIPSGWKVLWTTYGTHYNENYFKDPLSFNPSRFEEGIPQYVFVPFGGGPRVCAGYQLAKLNILIFVYYVVTQYEWFLLHPDESVTMDPLPFPSLGMPIRISPKYS. 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g00412 481 Coils Coil 227 259 - -
Seca8g00412 481 CDD CYP90-like 71 478 - -
Seca8g00412 481 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g00412 481 PRINTS E-class P450 group I signature 418 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g00412 481 PRINTS E-class P450 group I signature 281 298 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g00412 481 PRINTS E-class P450 group I signature 387 411 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g00412 481 PRINTS E-class P450 group I signature 301 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g00412 481 PRINTS E-class P450 group I signature 428 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g00412 481 PANTHER CYTOCHROME P450 26 35 465 - -
Seca8g00412 481 Pfam Cytochrome P450 39 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g00412 481 Gene3D Cytochrome P450 27 478 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g00412 481 SUPERFAMILY Cytochrome P450 35 478 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g00412 481 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 421 430 IPR017972 GO:0005506|GO:0016705
Seca8g00412 481 FunFam Taxadiene 5-alpha hydroxylase 29 479 - -
Seca8g00412 481 PRINTS P450 superfamily signature 348 359 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g00412 481 PRINTS P450 superfamily signature 419 428 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g00412 481 PRINTS P450 superfamily signature 292 309 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g00412 481 PRINTS P450 superfamily signature 428 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g00412 Seca-Chr8 4726462 4728664 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g00412 7 384 Cytochrome P450 AT2G42850 62.597 1.81e-160 458
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g00412 - - gmx:100793336 852.432