Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g00381 ATGATCTGCACGGTGAAACAACCTGGTATATCGATCAGAGGTTCTGATGTTGTTCTCCGGAAAAGGGGTTCAACCCCAGTTCAGTCATGTTCCCTTGTTTTACCTTCTATCTCTAGAGAAAAGGCTCAGAGATCTCTGGTTTCAGTGCAAAAGCCATTGCATCTTTCTTGTGTTGGTGTTGGGAATTTTGTTGGGTCAGTGAGGCGTGAAAGAAGTGATTTGGTAAAGTGTGGAGCTTATGAGGCAGATAAATCAGAGGTTGGAGGAGCTGGGGCTCCATCAGAGGCTGCTAAGAAGGTGAAAATTGGGATTTACTTTGCAACCTGGTGGGCACTGAATGTGGTGTTCAATATTTATAACAAGAAGGTGTTGAATGCATACCCCTACCCTTGGCTTACTTCAACTCTCTCGCTTGCATGTGGGTCTCTTATGATGTTGATCTCATGGGCCACCAGGATAGCTGAGGCACCTAAGACTGATCTTGAGTTTTGGAAGACTTTGTTCCCTGTTGCTGTTGCACATACAATAGGACATGTAGCGGCTACTGTTAGCATGTCAAAAGTTGCAGTATCATTCACCCATATTATCAAGAGTGGCGAGCCTGCTTTCAGTGTACTTGTTTCCAGATTTCTTTTGGGTGAGACCTTCCCAGTGCCAGTATATCTGTCTTTAATTCCAATCATTGGTGGATGTGCACTTGCTGCTGTGACTGAGCTCAATTTCAATATGACTGGTTTTATGGGGGCTATGATATCAAATTTGGCATTTGTATTCCGTAATATCTTTTCGAAAAAGGGCATGAAGGGAAAGTCTGTCAGCGGAATGAATTACTACGCATGTTTATCTATGTTGTCCTTGTTAATTCTGACACCATTTGCAATTGCTGTGGAGGGACCACAGATGTGGGCAGCTGGATGGCAAACAGCCCTCTCTCAAATTGGACCCCAGTTTATATGCAGGTGGGTGGCAGCTCAGAGCGTATTTTATCATCTGTACAATCAGGTGTCATACATGTCTCTGGATGAGATCTCTCCCTTGACATTTAGCGTTGGAAACACCATGAAACGTATATCTGTTATAGTTTCTTCAATCATTATCTTCCACACACCAGTTCGGCCTGTCAATGCTCTTGGAGCCGCTATTGCCATCCTTGGAACCTTCTTGTATTCACAGGCAAAGCAGTAG 1185 0.4405 MICTVKQPGISIRGSDVVLRKRGSTPVQSCSLVLPSISREKAQRSLVSVQKPLHLSCVGVGNFVGSVRRERSDLVKCGAYEADKSEVGGAGAPSEAAKKVKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIAEAPKTDLEFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPVPVYLSLIPIIGGCALAAVTELNFNMTGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSMLSLLILTPFAIAVEGPQMWAAGWQTALSQIGPQFICRWVAAQSVFYHLYNQVSYMSLDEISPLTFSVGNTMKRISVIVSSIIIFHTPVRPVNALGAAIAILGTFLYSQAKQ. 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g00381 394 SUPERFAMILY Multidrug resistance efflux transporter EmrE 144 236 - -
Seca8g00381 394 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 101 393 IPR004696 GO:0016020|GO:0022857|GO:0055085
Seca8g00381 394 PANTHER SOLUTE CARRIER FAMILY 35 101 393 - -
Seca8g00381 394 Pfam Triose-phosphate Transporter family 101 390 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g00381 Seca-Chr8 4306951 4312226 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g00381 1 393 Antiporters AT5G54800 75.931 0.0 574
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g00381 K15283 - gmx:100776233 651.744
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g00381 8 4306951 4312226 Seca6g03089 6 97012262 97016669 PCT