Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g00363 ATGGCGGACGTTGGTCTCTCCATTGCAGCCAAGCTTTTAGAATATTTGGTGGAGCCTTTGTTGCACCAGGCTCGTTATGTGTTATGTTTCAACAAAATTGTGAGAAACCTTCACGAAGAAAAAGAAAAGTTGATTTTATCCCAAAGGAATGTGAAGGAACATATCAAAGAAGCCAAAAGGAAAACTGAAATAGTTGAGGAAAGTGTAGAGAGGTGGATGAATGATGTGAGGACTATTTTAGAAGAGGTACAAAAACTGGAAGAAAAAACTGAAGAAAACAATAAGTGTTACCGTGTGCCTTTCCACTACTTCCTAACAAAAGAAGTAGCAAGTGTGACAGAGAAAATGATGAAGCTAAATGACTACAAATTTGAGCAATTTTCTAGGCGCACTGAACTTCCTGGCATGCAATACTTTTCATCTAAAAACTTTGTGTATTCCAAGTCTACAGAGAATGCTTATAATGAACTCATGGAGGCACTAAAAGATGTAAACAATCATATGATTGGTTTCCATGGGATGGGAGGATCCGGGAAAAGCACGTTGGTGAAAGAGGTAGGGAAGAAAGCTCAGGAGTTACACCTTTTTGACAAGGTTGTGATTGTTGTTGTCTCTCACAATCCATTACTGACAAAAATCCAAGGTGAAATTGCAGACAGTTTGGGTTTGATATTGAGGGAAGAGACATTATATGGCAGGGCACAAAGACTATCATTGAGCTTACAAAATGAGAGGACTCTTGTGATCTTGGATGATGTATGGGAGAAGCTTGACTTTGAAGCTATTGGAATTCCACCCAATTGCATTGTCCTTCTAACTACTCGTGGTAGAGATATATGTGTTTCTATGAACTGCCAAGTTATAGTTGAGTTGTCTCTCTTAGATGAAGAGGAAGCTTGGACTTTGTTTAAACGGTGTGCAGACATCATTGATGACTCACCATATGCCTTGAAGTTAAAGAATGTGCCAAGGAAAATTGCTAAAAAATGCAAAAGATTGCCTATTGCAATTGTGACCATGGCAAGTATGTTAAGAGGAAAGAAATTTGAAGTGTGGGAGTTAGCATTGTTGAGATTGGAGGAATCACATCGAATAGATGTTGAAGAAGAGTTGAGCAGTTTTTATGCATGTATCAAGTTAAGCTATGATAATTTGACAAAGCAAGTATCCAAATCTCTCTTTTTATTGTGCTCCATGTTTCCTGAGGACTGTGAGATTGGTGTGGAAGATTTGGTTCGGTACATGAAGGGACTTGGACCTGCTGCTGGCACTACAGGGACAATGGAAAAAGTGAGGAGAGAGATACAAGTGGCCATTTACTTCCTCAGAGATGCATATTTGTTGCAACCTAGTGGTCAAAGAGAATTTGTGAAAATGCATGATCTGGTCCGTGATGTGGCCTTATGGATTGCAACTAAAGAGGGTAAAGCAATTAAGGTAGCTACTCAAACATTGGAAGTAGAAGATGAAGACATAAAAGATTTAGCTGCAATGTCCTTATGGGGCATGGAGAATCAGAATCTACCTTCTACTGATAAATTGCAGTGTCCAAAACTCAAGACTCTTCTACTTCATTCCACTGATGAATCTTCTTTGCAAGTGCCAAATGAGTATTTTGAAGGGATGCAAATGCTAGAAGTCTTGGGGATTGTAAAATATTACTATACATGGCGCAACTTGTATACATTGTGTAACTTAAGCTCATCATTATCTACTTTGACCATACCACAATCAATCGAGAGATTAACAATGTTGCGAAGTCTTTGTCTAAGAGGATATGAACTAGGTGATATCTCTTTACTGGCAAGCTTAACAGGACTTGAGATTCTTGATTTGCGTAGTTCATCTTTCAATGAATTGCCACATGGAATTGTAGCTTTGAAGAAGTTAAGACTACTGGACATATACACCTGCCGCATCAAGAAGAACAACCCTTATGAAGTGATAAGAAAGTGTATGCAACTTGAGGAATTGTATATATGGAGAATTGAAGATGATTCTTTATATATTGTCTCATTGCCAAGGTTGCAAAGGTATGTCATAGTATGTGACAAGTTCAGGGAAAACTGTAGATTTCTTATAGATGCTTATCTAGAAGACCATGTGCCATCAAGAGCTTTATGCATAGACCAGTTTGATGCATCTGCTTTGATTCATGAATCATCATCAATCAAAGATTTATTTTTGAGAGCAGAGCACCTTTACTTGGGGCATCTTCGAGGAGGTTGCAAAAATATCATCCCACAAATGGATCAAGGAGGCATGACTGAGCTGATTGGACTAATACTTGAGTCTTGTTCTGAGATAGAGTGCCTCCTTGATACTACTTCACATACCAATTTGCCAGCATTTTTTGAGTTGGTTACCCTGAAGTTGATATGGATGGATGGTCTTAAACAAGTTTTCTGTGATCCAACTTCCCAATGTTGTCTTGAAAAATTAGAAGACCTACAAATAGAGTATTGTGTACAATTGAATAACATATCTTTTCCTAGGAAATCAAATATGTGCAATCTTAAGATCCTTAGATTACAGTGGTGCCCAATGCTAACATCACCACTCTTCACCCCTGTCATTGCTCGAAGCTTAGTTCTACTAGAGGAATTGAAATTATTTGATTGCAGCAAGTTGAAGCATATCATAGCAGAAGAACAAGAGGAAGATGGAAATTCCAGTAATCCAAGTCCTACCTTGAAAGTGTTCCCAAATCTAAGGATTCTTCATGTGCATGGATGTCATAGGTTAGAATCAATCTTTCCTGTCACATTTGCTCAAAGTCTAGAGAAATTGGAGAAGATAGCTATATGGTACAACTTTGGATTAAAGTATGTATTTGGCACACTCAATGACTACAAGCTCAGTGAGAGTGAGGCTAAACCCAACATCAACCTCCTTGCTTTAAGAACCATCTCACTTGTATCATTATCAAATTTGATCGACATTTGCCCTAGATATTGTCATCCAAGATCACCCAATTTGAAAGAGATAGAATACAGAGATTGTCCCCACCTGTCAACCAATGCAATGTTCAAGACTTTGATTGGTTCAAATATGCAACAAGGTCTTACACCTACAGAGGAGAAAATAATATTTCCTAAAAATGGAAAATCGATCCTAGCTTTGGAATGTCTTAGTATTGACCATTCCATGGTGGAAGGTATTTTCCAACTGCAAGTTGAAGGACAACAACCCTTGAACTCGAACTTGTCTCACTTATGTTTAAAGGATCTACCTGATTTGAGGCTCATTTGGAAGGGACCAAAAGATCTCCTCAACCTTCACAGACTTAAGAGTCTAATGCTAGTGGGATGCAAAAACTTGGAAACCATCTTCTACCCCACTATTGTTGGAAGCTTAGCAGAATTGACTGAACTGGTTGTAAGCAAGTGTGAACAATTGGAGCAGATCATTAACTCAGATCACACAGAGCAAGTTGGAAACCCATCTTCTCGTTCCAAATCAGCGTGCTTCCCTCTACTGTCCATTGTTCATGTCTATCAGTGCAATAATTTGAAATGCCTTTTTTCTCATTCATTGCCTTCTTCATTTCCTGACCTAGAATTTATTACAATAGAGGAGTGTTCTAAAATAGAACATATTTTCTATTTTAATTGCCATGTTGTTACATCTAATTATGATGATAAAGGTCAAGGAGCAGGACGGGTACTTGATGAAGACAAACAACCATTAGTGCTTCCAAAATTGAGAGAGGTAAAACTTGTAAGTTTGCCTAACTTCACTGAATTTTTCCAAGGGCCTTATAAGTTGCAGCAGAATGTGAAGCATTACACAGTGAGGCATTGTCCTAAATATACCTCTGCTTGGCTGCATACTGATAATCAGGAGAAGAGCCAAAATTCTTCCACACAATCACAAACAATTGGGAAAGTCTCAAGTATAGGATTAGGATCAGATGCTTGTGTTACTACCACCGGTGCTTGTGTTAGTGATCCTCAGATACAAGAGAGGGTGAGCAACTTGGAAAAATACTTAGAATCTGAGAGACAAAGACGAAGGTTGATGGAAACTGATTTGGAATCTGAGAGACAAAGGCAAAGGTTGATGGAGTTAGATTTGCAGGTTGAGAGGGAAAGACGGAGATTGATAGAATTGAAGTTGGAAGCTGAACAAGAAAGAAGACAGATCATGGAAGAATCATTGTTTTCTATCTTTCATCAAATGCTTGGAAGGGTCCCTCAACAATTTGTCGGTCTACTTTCTCAGAATCCTCCGGCACCAAATGAAGAAAGTGGGGATCAAGACATTCATGATGTACTGATACAATCCTCTTGA 4293 0.3853 MADVGLSIAAKLLEYLVEPLLHQARYVLCFNKIVRNLHEEKEKLILSQRNVKEHIKEAKRKTEIVEESVERWMNDVRTILEEVQKLEEKTEENNKCYRVPFHYFLTKEVASVTEKMMKLNDYKFEQFSRRTELPGMQYFSSKNFVYSKSTENAYNELMEALKDVNNHMIGFHGMGGSGKSTLVKEVGKKAQELHLFDKVVIVVVSHNPLLTKIQGEIADSLGLILREETLYGRAQRLSLSLQNERTLVILDDVWEKLDFEAIGIPPNCIVLLTTRGRDICVSMNCQVIVELSLLDEEEAWTLFKRCADIIDDSPYALKLKNVPRKIAKKCKRLPIAIVTMASMLRGKKFEVWELALLRLEESHRIDVEEELSSFYACIKLSYDNLTKQVSKSLFLLCSMFPEDCEIGVEDLVRYMKGLGPAAGTTGTMEKVRREIQVAIYFLRDAYLLQPSGQREFVKMHDLVRDVALWIATKEGKAIKVATQTLEVEDEDIKDLAAMSLWGMENQNLPSTDKLQCPKLKTLLLHSTDESSLQVPNEYFEGMQMLEVLGIVKYYYTWRNLYTLCNLSSSLSTLTIPQSIERLTMLRSLCLRGYELGDISLLASLTGLEILDLRSSSFNELPHGIVALKKLRLLDIYTCRIKKNNPYEVIRKCMQLEELYIWRIEDDSLYIVSLPRLQRYVIVCDKFRENCRFLIDAYLEDHVPSRALCIDQFDASALIHESSSIKDLFLRAEHLYLGHLRGGCKNIIPQMDQGGMTELIGLILESCSEIECLLDTTSHTNLPAFFELVTLKLIWMDGLKQVFCDPTSQCCLEKLEDLQIEYCVQLNNISFPRKSNMCNLKILRLQWCPMLTSPLFTPVIARSLVLLEELKLFDCSKLKHIIAEEQEEDGNSSNPSPTLKVFPNLRILHVHGCHRLESIFPVTFAQSLEKLEKIAIWYNFGLKYVFGTLNDYKLSESEAKPNINLLALRTISLVSLSNLIDICPRYCHPRSPNLKEIEYRDCPHLSTNAMFKTLIGSNMQQGLTPTEEKIIFPKNGKSILALECLSIDHSMVEGIFQLQVEGQQPLNSNLSHLCLKDLPDLRLIWKGPKDLLNLHRLKSLMLVGCKNLETIFYPTIVGSLAELTELVVSKCEQLEQIINSDHTEQVGNPSSRSKSACFPLLSIVHVYQCNNLKCLFSHSLPSSFPDLEFITIEECSKIEHIFYFNCHVVTSNYDDKGQGAGRVLDEDKQPLVLPKLREVKLVSLPNFTEFFQGPYKLQQNVKHYTVRHCPKYTSAWLHTDNQEKSQNSSTQSQTIGKVSSIGLGSDACVTTTGACVSDPQIQERVSNLEKYLESERQRRRLMETDLESERQRQRLMELDLQVERERRRLIELKLEAEQERRQIMEESLFSIFHQMLGRVPQQFVGLLSQNPPAPNEESGDQDIHDVLIQSS. 1431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g00363 1430 Gene3D Ribonuclease Inhibitor 1028 1215 IPR032675 -
Seca8g00363 1430 Gene3D Ribonuclease Inhibitor 718 944 IPR032675 -
Seca8g00363 1430 Coils Coil 1331 1385 - -
Seca8g00363 1430 Gene3D - 382 468 IPR036388 -
Seca8g00363 1430 Pfam NB-ARC domain 150 384 IPR002182 GO:0043531
Seca8g00363 1430 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 397 IPR027417 -
Seca8g00363 1430 Gene3D Ribonuclease Inhibitor 471 699 IPR032675 -
Seca8g00363 1430 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1042 1201 - -
Seca8g00363 1430 SUPERFAMILY RNI-like 1040 1199 - -
Seca8g00363 1430 SUPERFAMILY L domain-like 458 1002 - -
Seca8g00363 1430 Coils Coil 147 167 - -
Seca8g00363 1430 PRINTS Disease resistance protein signature 330 344 - -
Seca8g00363 1430 PRINTS Disease resistance protein signature 168 183 - -
Seca8g00363 1430 PRINTS Disease resistance protein signature 240 254 - -
Seca8g00363 1430 PRINTS Disease resistance protein signature 602 618 - -
Seca8g00363 1430 Coils Coil 55 93 - -
Seca8g00363 1430 Gene3D - 293 381 IPR042197 -
Seca8g00363 1430 Gene3D - 137 290 IPR027417 -
Seca8g00363 1430 MobiDBLite consensus disorder prediction 1407 1430 - -
Seca8g00363 1430 SMART AAA_5 165 293 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g00363 Seca-Chr8 4199920 4205320 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g00363 154 486 WRKY Transcription Factor Family AT5G45050 27.042 3.88e-13 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g00363 - - mtr:11431977 2112.04