Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g00336 ATGGAAGGTGTTATTGTGAGAAGAGTCATTCCTTCGGATAATAGTTGCCTCTTTAATGCAGTTGGCTATGTTATGGATCGTGACCGAAACAAAGCTGCTGACTTGAGACAGGTTATAGCTGCAACAGTGGCAAGTGATCCTGAGAAATATTCTGAAGCATTTCTTGGGAAGCCAAATGCAGAGTATTGTAACTGGATTCTTGACTCAGAGAAGTGGGGAGTAAAACTCCAAACACAACAAAACCCAAAGCGAAACAGCAAAATAGAGCAAAAACAGAAAACCCAAAACTGTTCAAACAAGAACGAAGAAAGTCAAAAAGAGTTTCAACAAGAACAGAGCAACAAGGCGAAGAGAACAACACTGTCTGTTGCACTGTCTCAGGCTCATAGTCACAGATTCTGGGCGTTGCAGGTCACAGCTCGCAACCAATGGCATCATGTCTCACTTGCAGGTTGCAGCTTGCAGATTCTGCTCAGGCACCACGCAGCAGCCTCCAACAATGGCATCTCAGTGTCTCACTCTCCATTATGTTTTTCTTTAGTTGGATGTGCTAATGAAGCTATATTCCTTTGTGAAGGTGCAATTGAACTTTCAATATTAGCAGATTATTATGGACGTGAAATTGCAGCATATGATATCCAGACCACACGATGTGATTTGTATGGTCAGGACCGTAACTACTCTGAAAGGGTGATGCTGATTTATGATGGTCTCCACTATGATGCATTAGCTATGTCTCCCGTTGAGGGAGCTCCTGAGGAGTTTGATCAGACCATATTTGCTGTACAGAATGACAGAAGCATTGGACCCGTCGAGGGGCTTGCTTTAAATTTTGTTAAAGACGAACAGAGGAAACGGAGATTCACTGACACTGCCAACTTCACTCTGCGCTGTGGGGTATGCCAAATTGGAGTAGTTGGTCAGAAGGAAGCAATGGAGCATGCGCAAGCAACTGGCCATGTTAACTTCCAAGAATATAGATAA 984 0.435 MEGVIVRRVIPSDNSCLFNAVGYVMDRDRNKAADLRQVIAATVASDPEKYSEAFLGKPNAEYCNWILDSEKWGVKLQTQQNPKRNSKIEQKQKTQNCSNKNEESQKEFQQEQSNKAKRTTLSVALSQAHSHRFWALQVTARNQWHHVSLAGCSLQILLRHHAAASNNGISVSHSPLCFSLVGCANEAIFLCEGAIELSILADYYGREIAAYDIQTTRCDLYGQDRNYSERVMLIYDGLHYDALAMSPVEGAPEEFDQTIFAVQNDRSIGPVEGLALNFVKDEQRKRRFTDTANFTLRCGVCQIGVVGQKEAMEHAQATGHVNFQEYR. 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g00336 327 MobiDBLite consensus disorder prediction 77 114 - -
Seca8g00336 327 Coils Coil 99 119 - -
Seca8g00336 327 CDD OTU_plant_OTU1_2-like 3 285 - -
Seca8g00336 327 MobiDBLite consensus disorder prediction 77 103 - -
Seca8g00336 327 Gene3D - 190 292 - -
Seca8g00336 327 Gene3D - 1 80 - -
Seca8g00336 327 PANTHER HIV-INDUCED PROTEIN-7-LIKE PROTEASE 193 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g00336 Seca-Chr8 3917471 3922247 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g00336 1 73 C2H2 Transcription Factor Family AT1G50670 78.082 1.50e-36 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g00336 K13719 - tcc:18593509 259.225