Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g00332 ATGAGACATGTTGGTGTGCACAATCACAAGAACCATGAACCTTTTGTCAACCAATCAAAAGCCCCTTCTCATCAAACTTACCAATCACCTGAGAAATTTGCTTCAGCACCTCAAAAACCTGTTCATAGGTTAGATACAATTCTTGGGAAGCCATTTGAGGATGTTAGGAAATTCTATACACTTGGGACAGAATTGGGAAGAGGCAAATTTGGGGTGACTTATCTCTGCATTGAGAATTCAACTGGCTTGCAATATGCTTGCAAGTCCATTTCAAAGAGTAGCAATGTTAATAAGGAGGATATAAAGAGGGAGATTCAAATTATGCAGCATTTGAGTGGACAACCCAACATTGTTGAGTTCAAAGGTGCTTATGAGGATAAACAATCTGTTCATGTTGTTATGGAGCTTTGTTCAGGTGGTCAACTTTTTGATAGGATTATTGCCAAGGGGCACTATAGTGAAAGGGATGCTGCTTCAATATGTATAGAAATAGTTAATGTTATCCATATTTGCCATTCTATGGGTGTGATGCATAGGGATCTGAAGCCAGAGAATTTCTTATTTTCCAGTAAGGATGACAAGGCACTTCTCAAGGCCACAGATTTTGGCTTGTCTGCCTTCATTGAAGAAGGAAAGGTGTATCAAGATTTAGTTGGCAGTCCTTGTTATGTGGCTCCAGAAGTTTTACGTCATAAATATGGGAAGGAAGTGGATATATGGAGTGCAGGAGTTATATTGTATATCTTACTTAGTGGTGTGCCTCCATTTTGGGGAGACACGACAAAGGAAATATTTGGTGCCATATTGAAAGGTCATATTGATTTTGAAAGTCATCCATGGCCAACCATATCAAACAGTGCTAAAGACCTAATTCGGAAGATGCTTATACAGGATCCAAAGAAACGCATTAACTCTGCTCAGATTCTAGAGCACCCCTGGATTAAAGAAGGTGAAAAGGCTTCTGACAAGCCAACAGACAGTGATGAGGAGTGGATCCCAACAGCGAAGCAAGCTTTTCTAAATCAACGGTTTCACTAG 1038 0.3998 MRHVGVHNHKNHEPFVNQSKAPSHQTYQSPEKFASAPQKPVHRLDTILGKPFEDVRKFYTLGTELGRGKFGVTYLCIENSTGLQYACKSISKSSNVNKEDIKREIQIMQHLSGQPNIVEFKGAYEDKQSVHVVMELCSGGQLFDRIIAKGHYSERDAASICIEIVNVIHICHSMGVMHRDLKPENFLFSSKDDKALLKATDFGLSAFIEEGKVYQDLVGSPCYVAPEVLRHKYGKEVDIWSAGVILYILLSGVPPFWGDTTKEIFGAILKGHIDFESHPWPTISNSAKDLIRKMLIQDPKKRINSAQILEHPWIKEGEKASDKPTDSDEEWIPTAKQAFLNQRFH. 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g00332 345 FunFam Calcium-dependent protein kinase 1 61 141 - -
Seca8g00332 345 Gene3D Phosphorylase Kinase; domain 1 61 142 - -
Seca8g00332 345 SMART serkin_6 59 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g00332 345 Gene3D Transferase(Phosphotransferase) domain 1 143 343 - -
Seca8g00332 345 Pfam Protein kinase domain 59 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g00332 345 PANTHER SERINE/THREONINE-PROTEIN KINASE 54 337 - -
Seca8g00332 345 FunFam calcium-dependent protein kinase 1 142 321 - -
Seca8g00332 345 SUPERFAMILY Protein kinase-like (PK-like) 46 324 IPR011009 -
Seca8g00332 345 ProSitePatterns Serine/Threonine protein kinases active-site signature. 176 188 IPR008271 GO:0004672|GO:0006468
Seca8g00332 345 ProSitePatterns Protein kinases ATP-binding region signature. 65 88 IPR017441 GO:0005524
Seca8g00332 345 ProSiteProfiles Protein kinase domain profile. 59 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g00332 345 CDD STKc_CAMK 58 313 - -
Seca8g00332 345 MobiDBLite consensus disorder prediction 15 33 - -
Seca8g00332 345 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g00332 Seca-Chr8 3861717 3863491 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g00332 19 327 EF-hand Containing Proteins AT3G20410 67.378 1.42e-164 468
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Seca8g00332 Pkinase 1.1e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g00332 K13412 - gmx:100798651 509.99