Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g00331 ATGGTTGATTTGGGCATTCAGATCCCCAGCACATTCGACCCATTTGCTGAGGCTAAAGAAACAGATGCACCTGGGGCCAAAGAGTATGTTCATATCCGCATACAACAGAGGAATGGGAAGAAGAGCCTAACCACAGTGCAGGGGCTCAAAAAAGAGTTCAGCTACGAGAAGATCCTTAAGGATCTCAAGAAAGAGTTTTGCTGTAATGGGAATGTTGTGCATGACAAGGAACTCGGCAAGATTATCCAACTCCAAGGTGATCAGCGCAAGAATGTTTCCCATTTCCTCATTCAAGCTGGCCTTGTCAAGAAGGACCACATCAAGATTCATGGTTTTTGA 339 0.4513 MVDLGIQIPSTFDPFAEAKETDAPGAKEYVHIRIQQRNGKKSLTTVQGLKKEFSYEKILKDLKKEFCCNGNVVHDKELGKIIQLQGDQRKNVSHFLIQAGLVKKDHIKIHGF. 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g00331 112 ProSiteProfiles Translation initiation factor SUI1 family profile. 30 100 IPR001950 GO:0003743|GO:0006413
Seca8g00331 112 FunFam Eukaryotic translation initiation factor SUI1 2 112 - -
Seca8g00331 112 CDD eIF1_SUI1 28 111 IPR005874 GO:0003743
Seca8g00331 112 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 8 112 - -
Seca8g00331 112 Gene3D - 2 112 - -
Seca8g00331 112 PIRSF Transl_init_SUI1_Euk 1 112 IPR005874 GO:0003743
Seca8g00331 112 Pfam Translation initiation factor SUI1 27 100 IPR001950 GO:0003743|GO:0006413
Seca8g00331 112 NCBIfam translation initiation factor SUI1 6 112 IPR005874 GO:0003743
Seca8g00331 112 SUPERFAMILY eIF1-like 3 112 IPR036877 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g00331 Seca-Chr8 3859661 3859999 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g00331 1 112 Eukaryotic Initiation Factors Gene Family AT5G54940 83.036 5.92e-68 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g00331 K03113 - cpap:110820651 211.075