Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g00326 ATGGGGGATGAGTCGCCAAAAAATAAAGTAAAGTTCTTGTGTAGCTACGGCGGAAAAGTTCTCCCACGACCCTCCGATGGAGTCCTCAAGTATGTGGGCGGCGAGACTCGTGTCATTTGTGTCCCTCGTAATACCACTTTCTCCGAGGTTATGAAGAAGGTGAGTGGCATGACTGAATATGATATAGTCCTCAAATACCAGATGGTTCCTGAAGATTTAGATGCTTTGGTGTCGGTGAGAACAGATGAAGATCTTAAACACATGATTGAAGAACATGATCGACATGAGAGTGCAGGAACACCATTGCTTCGTGCTTTCCTCTTCCCTTTGAAGCCAATTTTGGTTGACAACCAACATCAACAACATCAAATTCAAGTTCTTCAACCACCCCCATGTGAACCATATTTGTTAGAACAACGTTATATTGATGTTGTCAATGGCATCACACGTACAAGTCCAAGGGCGAAGCAGAACACGGTTTGCTCTGCTTGTTCTTCTCCAAAATCAAACTCCCCAGATGGCCATACTGCTGAATCACCATTATTCCAACCTGGGCGCCTTTCAACAATGAGTAGAGTGCGAAGCTCTCCTAGCCTCACCAACCTTAATATTAACAATCCACATGATCATGGTCATGGTCATCATCACCCTTTTGCTTATCCATTATCATCATCATTATCATATAAACCCCCACAAGATCCTCAATTAGGACTAGGAGGGATTGGGATGGTAAGGCCTCCACCCCAAATTATGACAGATATTGGTAGAGGGGGTTTTAACTATTATTATTCAACACCCAGACCCCATAAAGGCTACGCTCCCCAAGATGACTCTGTACCTTATGGTCATGTCATGTTTGAGAGAGTTCATAGTGTGCCTCGGAGTCCTCGAAAATCCATATGGGAGTAG 909 0.44 MGDESPKNKVKFLCSYGGKVLPRPSDGVLKYVGGETRVICVPRNTTFSEVMKKVSGMTEYDIVLKYQMVPEDLDALVSVRTDEDLKHMIEEHDRHESAGTPLLRAFLFPLKPILVDNQHQQHQIQVLQPPPCEPYLLEQRYIDVVNGITRTSPRAKQNTVCSACSSPKSNSPDGHTAESPLFQPGRLSTMSRVRSSPSLTNLNINNPHDHGHGHHHPFAYPLSSSLSYKPPQDPQLGLGGIGMVRPPPQIMTDIGRGGFNYYYSTPRPHKGYAPQDDSVPYGHVMFERVHSVPRSPRKSIWE. 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g00326 302 SUPERFAMILY CAD & PB1 domains 25 113 - -
Seca8g00326 302 PANTHER OS05G0427100 PROTEIN-RELATED 3 263 - -
Seca8g00326 302 CDD PB1_UP2 13 108 - -
Seca8g00326 302 MobiDBLite consensus disorder prediction 163 186 - -
Seca8g00326 302 Pfam PB1 domain 29 108 IPR000270 GO:0005515
Seca8g00326 302 Gene3D - 30 108 - -
Seca8g00326 302 SMART PB1_new 24 110 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g00326 Seca-Chr8 3818339 3819555 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g00326 3 170 MAP Kinase Kinase Kinase AT3G46920 39.766 9.46e-32 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g00326 - - tpra:123910761 326.635