Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g00303 ATGGCGAATTTGCCCCAATCCCTCTCCATAAACGGCGCGTCGTTTGCATCTGCTTCCGCCACTCCATCCAACATCGCCGCCAATAAGGATCGTAAGATGGCTTCCGCGGAGCAACTTGTTCTCGAACTCAGCAACCCCGATCTTCGAGAAAACGCTCTTCTTGAACTTTCCAAGAAGAGAGAGTTGTTTCAGGATCTTGCACCATTATTGTGGAATTCTTTTGGTACTATTGCAGCACTTTTACAGGAAATAGTTTCAATATACCCTGTTATTTCACCACCGAATCTTACTCCAGCACAATCAAATCGAGTATGCAATGCTCTTGCCCTGCTTCAGTGTGTGGCATCTCACCCTGAGACAAGGACGCAATTCCTCAATGCTCACATACCTCTATATCTGTATCCCTTCCTTAATACAACAAGCAAGTCAAGACCATTTGAGTATTTGAGGCTTACCAGTCTCGGTGTTATTGGTGCCTTGGTGAAGGTTGATGACACAGAAGTTATAGCTTTCCTTCTTTCAACTGAGATAATTCCGCTGTGCCTGCGCACCATGGAAATCGGCAGCGAATTGTCAAAAACTGTTGCAACATTTATACTTCAAAGAATTGTGTTGGACGATATTGGTTTGGATTATGTTTGTGCTACAGCAGAGCGCTTTTTTGCAGTAGGTCGAGTTTTGGGGTGCATGATAGCAATTCTTGCTGAGCAACCTTCACCTCGTCTTTTGAAGCATATTATTCGATGTTATCTTCGTCTGTCAGATAATCGAAGGGCTTGCGATGCATTAAGAAGCTGTCTTCCGGATATGTTAAGAGATGCCACTTTCAGTAGTTGCCTTCATGAAGATCCAACAACTAGGAAGTGGCTACAACAGTTGCTTCACAATGTTGGAATGAATCGGCTTCCTTCACTACAAGCTGGAGGAGGATTTGATCATATGATGGTGTCGTGA 954 0.4403 MANLPQSLSINGASFASASATPSNIAANKDRKMASAEQLVLELSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVISPPNLTPAQSNRVCNALALLQCVASHPETRTQFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVIAFLLSTEIIPLCLRTMEIGSELSKTVATFILQRIVLDDIGLDYVCATAERFFAVGRVLGCMIAILAEQPSPRLLKHIIRCYLRLSDNRRACDALRSCLPDMLRDATFSSCLHEDPTTRKWLQQLLHNVGMNRLPSLQAGGGFDHMMVS. 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g00303 317 SUPERFAMILY ARM repeat 41 298 IPR016024 -
Seca8g00303 317 Gene3D - 27 298 IPR011989 -
Seca8g00303 317 FunFam Cell differentiation protein RCD1 29 300 - -
Seca8g00303 317 Pfam Cell differentiation family, Rcd1-like 39 297 - -
Seca8g00303 317 PANTHER UNCHARACTERIZED 29 300 IPR007216 GO:0006402|GO:0030014
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g00303 Seca-Chr8 3573915 3579229 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Seca8g00303 Rcd1 3.9e-127 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g00303 K12606 - cit:102618037 552.747