Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g00283 ATGAGCTTGCTTCCTCAACCAATGTTTTTCTTTAAAATCTTATTTATTTGCTTCTCTTTGTATTTTGGTAAAGCCATGGATTGTGGTGGGAAGCAGGTTCCAAATACCATCATTGTTGATCAACATGGCAAAGGAGAATTCAACACGATTCAAGCTGCCATTGATTCTATAAAGAGCCCAAATGATCAATGGATTAAGATTCAAGTAAACCCCGGCACATATGTGGAAAAGGTTTCTATTCCCAAAGGGAAGCCATGCATCATTTTGGAAGGAGATAATAGGCAGAACACAATCATTACTCACGGTGATCATCAATCAATATCAAACTTCAGTGCTACATTTAGTTCATCCCCACCTAATGTGGTTGTAAGTGGCATTACTTTTAAGTGGTTGAAAAAGTATAAGCACACAAATTATGGAATTGAAATAGCAGTGGCAGCTAGTGTATCTGGAGACAAATCTGCCTTCTTCAGTTGTAGTTTCATGGGTTATCAAGACACCCTGCGAGATTCAATTGGACGCCATTACTTTAAAGATTGCTACATTCAAGGTGAAATAGACTTCATTTTTGGTTCTGGCCAATCATATTATGAGAATTGTGCAATCAATGCCACGCAAGGGAATTCTTCACCTCCGGGTTTTGTTACAGCCCAAAGTAGGAAATCACCAAATGAAACAAATGGTTTTGTTTTTGAGGTAGGTTCCATTGATGGGAATGGTAAAGTGGATCTAGGAAGAGCATGGGGTCCTTACTCAAGAGTTATATTTCATAGAACAATCTTTTCTTCAGTGGTAACCCCTAAAGGATGGAATGCTTGGAGCTTCACAGGCAACGATAACTTCATTTATGCTGAAGTTAATTGCACTGGAAAAGGGAGCAATACTTCAGAGCGTCCCCCTTGGGTAAAGAAGGAAATGAGTCCATCAGAGCTCAATGAATATTCTTTATCATCTTTCATCAACAAAGATGGTTGGCTTGCCAACATACCAACTATGTTCTTGTAA 1005 0.3881 MSLLPQPMFFFKILFICFSLYFGKAMDCGGKQVPNTIIVDQHGKGEFNTIQAAIDSIKSPNDQWIKIQVNPGTYVEKVSIPKGKPCIILEGDNRQNTIITHGDHQSISNFSATFSSSPPNVVVSGITFKWLKKYKHTNYGIEIAVAASVSGDKSAFFSCSFMGYQDTLRDSIGRHYFKDCYIQGEIDFIFGSGQSYYENCAINATQGNSSPPGFVTAQSRKSPNETNGFVFEVGSIDGNGKVDLGRAWGPYSRVIFHRTIFSSVVTPKGWNAWSFTGNDNFIYAEVNCTGKGSNTSERPPWVKKEMSPSELNEYSLSSFINKDGWLANIPTMFL. 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g00283 334 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 31 327 - -
Seca8g00283 334 Pfam Pectinesterase 37 322 IPR000070 GO:0030599|GO:0042545
Seca8g00283 334 FunFam Pectinesterase 31 330 - -
Seca8g00283 334 SUPERFAMILY Pectin lyase-like 33 330 IPR011050 -
Seca8g00283 334 Gene3D - 30 333 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g00283 Seca-Chr8 3401850 3404664 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g00283 10 279 Carbohydrate Esterase AT2G19150 45.620 2.25e-76 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g00283 - - tpra:123922273 398.282