Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g00268 ATGGGTTTCTTGATTACCACCCTAATCTTCGCACTGATTGGAATTATCGCGTGCATTTGTACCACAATTTGCTGCAACAAAGGACCTTCTACTAATCTATTTCACCTAACTTTGGTTCTTACTGCAACAATATGCTGCTGGATGATGTGGGCGATTGTATATTTGGCACAGATGAAACCGCTTATAGTTCCTATCTTGAGTGAAGGCGAATAA 213 0.4038 MGFLITTLIFALIGIIACICTTICCNKGPSTNLFHLTLVLTATICCWMMWAIVYLAQMKPLIVPILSEGE. 71
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g00268 70 Pfam ATP synthase subunit H 3 67 IPR008389 GO:0033179|GO:0046961|GO:1902600
Seca8g00268 70 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT H 1 68 IPR008389 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g00268 Seca-Chr8 3249723 3252207 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g00268 1 70 Primary Pumps ATPases(2) AT5G55290 80.000 5.27e-38 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g00268 K02153 - gmx:100781475 131.339