Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g00257 ATGAATCTCTCTCTCTCTTCCCTCACCCCACACCCCACCTTCCTATATATACTTTATTTTTGGTACATACCTTCCTATATATACTTTAAAGCACCTTTGTCTTGCTCCTTACATTTTCATCAATATACTACTTTCTTCTTACATTCTCACCAATTTCACAAAATGCCAGACCAATACCTTAAAGAACCTCGTCTTGTAGCCAGGAAGTTCTTAGCCAAACCTCAACATGAAGGTGTTGGGGCAGTTGTTAGAAGAAGCATAGGAAGATTTGAGCTCAAGTACTTTGATCCTTTCCTTGTCTTGGATGAATTCTCAGTTGCTGCTCCTGCTGGGTTTCCTGATCATCCACATAGAGGTTTTCCAATTGGACTTTCTGTGTCATTTAATTTAAGCTTTGAGACAGTCACATACATGTTGCAGGGAGCTGTAACGCATGAAGACTTTGAAGGGCATAAGGGAACTATTGAAGCTGGTGACTTGCAGTGGATGACTGCAGGGAGAGGAATTGTTCACTCAGAAATGCCTGCTTCTCAAGGAACCCAAAAGGGTCTTCAGCTGATTGAACCAAGGTATCAAGAAATGTTGAGCAAGGACATAGCAGAAGCTATGAGGGATGGTATCAAGGTTAGAGTTATAGCAGGGGAAGCACTTGGGATAAAATCTCCAATCTACACAAGGACTCCAACCATGTACTTGGACTTTTCTCTAAAACCAGGGGCACACTTACAACAATTTATACCAAAATCATGGAATGCTTTTGTGTACATCTTGGAAGGAGAGGGAGTGTTTGGAAACCAAAAATCTCAACCTACAACACCTCACCATATTCTTCTTCTTGGTCCTGGGGATGGACTAGAGGCATGGAACAAATCTTCTAAGCTACTTAGGTTCATTTTGGTTGGAGGGGAACCATTGGGTGAACCTGTGGTGCAATTTGGACCCTTTGTGATGAATACTCAAGAAGAGATTGACCAAACCATTGATGATTTTGAGAACTATGCCAATGGATTTGAGAAAGCAAGACACTGGAGGTCTGAGAGTGCAATTAGTCTTGATTTTTAA 1062 0.4143 MNLSLSSLTPHPTFLYILYFWYIPSYIYFKAPLSCSLHFHQYTTFFLHSHQFHKMPDQYLKEPRLVARKFLAKPQHEGVGAVVRRSIGRFELKYFDPFLVLDEFSVAAPAGFPDHPHRGFPIGLSVSFNLSFETVTYMLQGAVTHEDFEGHKGTIEAGDLQWMTAGRGIVHSEMPASQGTQKGLQLIEPRYQEMLSKDIAEAMRDGIKVRVIAGEALGIKSPIYTRTPTMYLDFSLKPGAHLQQFIPKSWNAFVYILEGEGVFGNQKSQPTTPHHILLLGPGDGLEAWNKSSKLLRFILVGGEPLGEPVVQFGPFVMNTQEEIDQTIDDFENYANGFEKARHWRSESAISLDF. 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g00257 353 CDD cupin_pirin_N 81 186 - -
Seca8g00257 353 Pfam Pirin 83 186 IPR003829 -
Seca8g00257 353 Pfam Pirin C-terminal cupin domain 231 334 IPR008778 -
Seca8g00257 353 PANTHER PIRIN-RELATED 60 347 IPR012093 -
Seca8g00257 353 Gene3D Jelly Rolls 200 305 IPR014710 -
Seca8g00257 353 Gene3D Jelly Rolls 77 331 IPR014710 -
Seca8g00257 353 SUPERFAMILY RmlC-like cupins 64 345 IPR011051 -
Seca8g00257 353 CDD cupin_pirin_C 228 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g00257 Seca-Chr8 3145656 3148792 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g00257 63 341 Calmodulin-binding Proteins AT3G59220 55.326 1.14e-113 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g00257 K06911 - gmx:100790637 538.495