Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g00245 ATGCAAGCCTTGTGGGTCTCCTTGAAGGATAATGTTAAATGTGGAAACAAGCTCACCGATGTAATCAAGCAGCCAGCAAAATATGGCAAAGGAAGTAGCTACGTTTCAGAAAAGGAGAAGAAAATGAATGAAGAAGATAATGGTTCTCTAATGGAAACTCCACCTACTCCTAGCCAAGTAGTTTCCAAGCCAAGCAACAAGCTTGGACGCCTTTATGAGCTCAGTATTGGTGACCCTTCAAGGAAAATTGTTGAGATGATATTTCAGAAAGCTTGGATGAACACCTCAAAGCCACTGAGGAAGGTTAGAACAGTCCTCAGGGTGAGTTACTCAGCAGAAGTTCTTGAAAGGTTTGAAAAGTACAGAGAAAAGGTGAAGAAGAATGCCTGTGACTGTGAGCAATATCCAAGGCATCCAAGGAGCACAGTAGATGGAAATGAATTGTTGCGGTTCTATGTCACTACAATGAGATGTTTCCAAGGGAAACCTGTGAAGAAAGTTTATGATCTATGTAAAGATCCATCTTGTTGTCTTTGCCAAATAATTCAATTCAATTTCAACACAGAACATGCTGGGATTCAATTGAATACAAGTGACAAAGAGTTGACTAACAGAACAACCACCAATGCAAGAGTAAAGAATGTGAGAAGAGCAGCAATAGTTTGCAGGATAATTGCTGGAAATGCAGTAAATGAAGTTGATGGTGAATATGAAGGGAATGACTCAACTGGGCTAGGAGAAATGCAATTTAGCTTAGAAAAATTTGTAGTACAAAATCCCAGTTCTATTCTTCCTTGTTTTGTTATAATGTTCAGCTGA 819 0.3919 MQALWVSLKDNVKCGNKLTDVIKQPAKYGKGSSYVSEKEKKMNEEDNGSLMETPPTPSQVVSKPSNKLGRLYELSIGDPSRKIVEMIFQKAWMNTSKPLRKVRTVLRVSYSAEVLERFEKYREKVKKNACDCEQYPRHPRSTVDGNELLRFYVTTMRCFQGKPVKKVYDLCKDPSCCLCQIIQFNFNTEHAGIQLNTSDKELTNRTTTNARVKNVRRAAIVCRIIAGNAVNEVDGEYEGNDSTGLGEMQFSLEKFVVQNPSSILPCFVIMFS. 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g00245 272 MobiDBLite consensus disorder prediction 33 64 - -
Seca8g00245 272 MobiDBLite consensus disorder prediction 49 64 - -
Seca8g00245 272 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 66 270 - -
Seca8g00245 272 SUPERFAMILY ADP-ribosylation 71 272 - -
Seca8g00245 272 MobiDBLite consensus disorder prediction 33 47 - -
Seca8g00245 272 Gene3D - 69 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g00245 Seca-Chr8 3031490 3032576 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g00245 71 270 C2H2 Transcription Factor Family AT5G54630 34.862 2.01e-31 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g00245 - - gmx:100779612 408.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g00245 8 3031490 3032576 Seca8g00245 8 3031490 3032576 ECH