Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g00218 ATGGACCTTCACATCCCTTTCTCCATTTCCTTCATTGCCTCCTTTCTCTTTCTCTTCGTTCTATTCAAATTAGTTAAAAGATCAACTACTTCCAACATTAACAACTCCACTACCAGTTTACCACCTGGACCAAGGCCACTCCCTCTCATAGGAAACTTACACCAAATTCTAAGCCCATTGCCACATCACTGCTTCAGAAATTTGGCACAGAGGTATGGACCCTTGATGCACCTAAAACTAGGAGAGGTGTCCCACATAGTAGTTACTTCACCAGAAATCGCCAAAGAAATTTTGAAAACACATGACCTCAACTTTTGTGATAGGCCTAAACTTCTATTGGCCACAGTACTTACTTACAATATTACAGACATTGCTTTCTCTCCATATGGAGAATATTGGAGGCAACTAAGAAAGATATGCACTATTGAGCTATTGAGTGCAAAGCGTGTCCAATCATTTCGTTCCATAAGAGAAACAGAGGTCTCAGAATTTGTTAAAACAATAACTGCTTGTGAAGGATCCGTTGTTAATCTGAGTCACAAGATTTTCTCAATGACATATGGGATAGTAGCGCGGGCAGCGTTTGGGAAAAAAAACAGACACCAAGAAGTGTTCAAATCAAGGATTGAGGAAGCATTGAATCTGTTAGGAGGATTTTGTGTTGCTGATCTCTATCCTTCTATTAGAGTGCTTCGATGGATGAGTAGTGCAAAGGTCGAAATGGGAAAACTGCAGAGAGAGCTTGATAGGATATTGCAAGACATCATTGATGATCATAAAAATAAAAAAAGTAGCAACCACCAGGAATCAGGGGAAGATCTAGTGGATGTTCTTCTAAAGTGTCAACAGGAAAATGATTCGGAAGATCCCTTGACTGATGACAATATTAAAGCAGTCATCCAGGATATATTCACTGCTGGTAGTGAAACATCCTCAGGGATTGTGATATGGGGGATGTCAGAAATGATGAAGAACCCAAAGGTGATGGAAGAAGCACAAGCTGAGGTGAGAAGGGTGTTTGATAGCAAGAGATATGTGGATGAGACTCATTTGCACCACTTGATATACTTAAAATCTATCATCAAAGAAACCATGAGGCTACATCCATCCATACCATTGTTAATTCCAAGAGAAAGTAAGGAGAGATGCCTAATCAATGGATATGAGATACCAGCTAAGAGCAGAGTTACTATAAATGCTTGGGCAATTGGAAGAGACCCTAAGAGGATATGCCCTGGAATTGCATTTGCCTTACCCAACATAGAGCTAGCACTTGCTCAATTGCTTTACCATTTTGATTGGAAACTTCCCCCTGGAATGAAGAATGAAGAACTTGATATGAATGATTCATTTGGATTTACTCTAAGGAAGAAAAACGACCTCTGGTTGATTCCTATCACTCATCGTCGACCTTAA 1416 0.3997 MDLHIPFSISFIASFLFLFVLFKLVKRSTTSNINNSTTSLPPGPRPLPLIGNLHQILSPLPHHCFRNLAQRYGPLMHLKLGEVSHIVVTSPEIAKEILKTHDLNFCDRPKLLLATVLTYNITDIAFSPYGEYWRQLRKICTIELLSAKRVQSFRSIRETEVSEFVKTITACEGSVVNLSHKIFSMTYGIVARAAFGKKNRHQEVFKSRIEEALNLLGGFCVADLYPSIRVLRWMSSAKVEMGKLQRELDRILQDIIDDHKNKKSSNHQESGEDLVDVLLKCQQENDSEDPLTDDNIKAVIQDIFTAGSETSSGIVIWGMSEMMKNPKVMEEAQAEVRRVFDSKRYVDETHLHHLIYLKSIIKETMRLHPSIPLLIPRESKERCLINGYEIPAKSRVTINAWAIGRDPKRICPGIAFALPNIELALAQLLYHFDWKLPPGMKNEELDMNDSFGFTLRKKNDLWLIPITHRRP. 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g00218 471 Gene3D Cytochrome P450 32 465 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g00218 471 SUPERFAMILY Cytochrome P450 39 465 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g00218 471 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g00218 471 PRINTS P450 superfamily signature 411 422 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g00218 471 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g00218 471 Coils Coil 234 254 - -
Seca8g00218 471 PRINTS E-class P450 group I signature 185 203 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g00218 471 PRINTS E-class P450 group I signature 93 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g00218 471 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g00218 471 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g00218 471 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g00218 471 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g00218 471 CDD CYP71-like 71 461 - -
Seca8g00218 471 Pfam Cytochrome P450 408 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g00218 471 Pfam Cytochrome P450 41 408 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g00218 471 FunFam Cytochrome P450 99A2 30 409 - -
Seca8g00218 471 PANTHER CYTOCHROME P450 71B11-RELATED 408 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g00218 Seca-Chr8 2661553 2664455 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g00218 17 471 Cytochrome P450 AT3G26300 38.353 7.47e-117 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g00218 - - mtr:11442302 590.497