Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g00212 ATGGAGGATCATTTCTTATCATTTCCCATCATTCTCAGTCTTATCCTCTTAATGTTTTTGATCCTAAAAGTGGGAAAGAGATTCAAAACCACTGGAACAACCTCTAATCTTCCTCCAGGGCCATGGAAGCTGCCAATTTTTGGAAGCATACACCACCTAATTGGCTCCCTTCCCCACCACAGACTGAGAGAATTGTCCAAAAAATATGGCCCTCTCATGCACCTACAACTTGGAGAGACATCAGCCATAGTAGTTTCTTCTCCAGAAATTGCAAAAGAGGTGTTGAAAACCCATGAAGTCACATTTGCTCAACGACCTCGCTGTCTTGATGCAGAAATTGCAGCTTATGGTTGCACTAACATTATCTTTTCACCTTATGGAGACTATTGGAAGCAGATAAGAAAAATATGCACACTGGAGCTATTGAGTGCTAAGCGTGTGCGATCATTCCAATCAATCAGGGAGGAAGAGGTATCAAATTTAGTAAGATATATATCTATGAACACTGGATCCTCTATCAACCTTGCGGATAAAATTTTATCTATGGCATATAAAATCGTTGCAAGGGCAGCTTTTGGTGATAAATGGAAAGACCAAGAAGCATATATCTACATTATCAAGAAAAGTTTGAGATTGGCAGAAAGTTTCAGTGTTACTACTTTGTTTCCCTCCCAACATTGGCTACATGTGATTAGTGGAATGACACATAAATTGGAGGAAATACATAGGACTAATGATATGCTTCTTGAAAATATCATCAATGAAGCCCCAACAAAGACTGGTGAAGATGGAAGTCTTCTGTCCGTTCTTTTGAATCTGAAAGATCATGGTGACCCTGAATTTCATTTGACAATCAACAACATTAAAGCCATTATTCAGGACATGTTTCTTGCCGGAAGTGAGTCATCATCTACAGTTTTGGAATGGGCTTTCTCAGAAATGCTGAAAAACCCAAGAGTACTGAAAAGGGCTCAAGCAGAAGTTAGGCAAGTTTTTGGTAGCAGAGGATATGTTGAGGAAATGGCTCTTCAAGAACTGAAATATCTAAAAGCAGTGATTAAAGAAACATTGAGAGTACACCCTCCTGCTCCTTTACTACTTCCAAGAGAGTGTCGTGAAACTTGTGAGATTAATGGATACACAATACCAGCTGGAACCCAAGTGTTTGTAAATGCATGGGCAATTGGAAGAGACCCAAAGTACTGGAGTGAAGGAGAGAAGTTTTATCCTGAGAGATTCTTGGATTCTCCAATGGACTACAAAGGGTCCAATTTTGAATTCCTACCCTTTGGTGCAGGGAAGAGAATATGTCCTGGCATTTTGTTTGCTATACCTAGTATTGAACTCCCACTAGCACAGTTACTGTACTATTTTGATTGGGAACTTCCCTTTGGAACCAGTCATGAGAATTTTGACATGACTGAAGCTTTTGGCACTGCAGTGAGAAGGAAAAGTGATCTACTTGTAGTTCCCATTTCTTACAATCCAGTACCTGTTGAATGA 1503 0.3979 MEDHFLSFPIILSLILLMFLILKVGKRFKTTGTTSNLPPGPWKLPIFGSIHHLIGSLPHHRLRELSKKYGPLMHLQLGETSAIVVSSPEIAKEVLKTHEVTFAQRPRCLDAEIAAYGCTNIIFSPYGDYWKQIRKICTLELLSAKRVRSFQSIREEEVSNLVRYISMNTGSSINLADKILSMAYKIVARAAFGDKWKDQEAYIYIIKKSLRLAESFSVTTLFPSQHWLHVISGMTHKLEEIHRTNDMLLENIINEAPTKTGEDGSLLSVLLNLKDHGDPEFHLTINNIKAIIQDMFLAGSESSSTVLEWAFSEMLKNPRVLKRAQAEVRQVFGSRGYVEEMALQELKYLKAVIKETLRVHPPAPLLLPRECRETCEINGYTIPAGTQVFVNAWAIGRDPKYWSEGEKFYPERFLDSPMDYKGSNFEFLPFGAGKRICPGILFAIPSIELPLAQLLYYFDWELPFGTSHENFDMTEAFGTAVRRKSDLLVVPISYNPVPVE. 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g00212 500 FunFam Cytochrome P450 71D8 30 491 - -
Seca8g00212 500 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Seca8g00212 500 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g00212 500 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g00212 500 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g00212 500 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g00212 500 PRINTS E-class P450 group I signature 350 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g00212 500 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g00212 500 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g00212 500 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g00212 500 PRINTS E-class P450 group I signature 391 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g00212 500 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g00212 500 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g00212 500 PRINTS P450 superfamily signature 351 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g00212 500 Pfam Cytochrome P450 38 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g00212 500 SUPERFAMILY Cytochrome P450 38 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g00212 500 Gene3D Cytochrome P450 31 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g00212 500 CDD CYP71-like 68 487 - -
Seca8g00212 500 PANTHER OS08G0105600 PROTEIN 60 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g00212 Seca-Chr8 2586345 2588767 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g00212 11 491 Cytochrome P450 AT3G26310 40.650 1.52e-125 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g00212 - K23807 gmx:100779851 647.121