Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g00151 ATGCCGCAGGAGAGCTTATCAAACTCAATTTTCATATCTCCTTGCAAGAGAGGGTTGAATTTGAAAGGTTCAGTCTTTAACAACAATGAGGCTATGTACATTGTGACGGAAGAGAGCATCAACGATCATGAATTGGCTCAGAGGAAAGCAGAGGAAGCAGCTTCAAGGAGGAATCAAGCTTCAGAATGGCTTCGTCAAATGGACGATGTCGCATTTTCATCACTCTCCAAAGAACCCTCCGAAGAAGAATTCTCTCTTTCACTCCGCAATGGTCTCATTCTCTGCAACGTCCTCAACAAAGTCAATCCTGGTGCTGTCCTCAAGGTCCTTTTTCTCTTCTTTCCCCTTTTCCCTCTTTCAATTTTCCATGCATTTTCTGCTCCACTGATTTCCTTTTCTACTCCTTGTTTGGGAATTGCAATGGAAAAAAAAATAAAGGTGGTGGAGAATCCTGTCCTTGCGGTTCAATCTGCAGAGGGAGCAGCACAGTCTGCGATTCAGTATTTCGAGAATATGAAAAATTTTCTGGATGCTGTTAAGGATATGAAGCTTTTGACGTTTGAAGTTTCGGATTTGGAAAAGGGGGGTTCATCAAGTAAAGTTGTGGACTGCATTCTCTGTTTGAAGGGATATTATGAATGGAAGCTTTCAGGTGGAGTTGGGGTTTGGAGGTATGGAGGAACTGTGAGGATTACTTCCTTCCCTAAGGGGTCTCATTCCTCCATTGTAGGCAGTGAAAATGCTGATGAGTCCTTGGATGAGTCTGAGTCATCACAGTATGAACAGTTACTTGAATTTCTCCATCTATCTGGAGAGGTCTCAGTTGAAGAAACCAAAACTGCCAATGCTCTGGCTTTCCTGTTTGATCACTTAGGTCTCAAACTTCTCTTGGCTTATCTCAGAGAGGCTGATGGGGTTGAAGATCTACCACTTAATGCAATGGTAATTGATACTTTACTCAGGAAGGTAGTCAGGGATTTTTCTGCATTGCTTGCTTCTCAAGGCACTCAGCTCGGACATTTCCTCAAGAAAATGTTGAAAGGAGATATTGGTTGCCTCTCTAAGAGAGAATTCATAGAAGCTATCACATTATATCTTAATCAAAGAAGTAGTTTGGCTTCAAATGATTTCTCTAAATTCTGCACTTGTGGTGGAAAACTTGATAGTACTCGGCATAATGTCAATTATTCTGCCAAGCACGCTGAAATAATTGATGCTCAGCAGAAACAACTTGAGGGGATAAAGTACTTCTTTGAAGAGATAAAACTGGAGGTCAAGCAGATCCAATCTAAATGGGACCAGGAACTGAGCAGGCTTGAGAATCATATAAAGAGCCTTGAAGTGACCTCCTCTTCCTACCACAAAGTTTTAGAGGAGAACCGCGTTCTTTACAATCAAGTGCAAGACCTCAAAGGAGCCATTAGGGTCTACTGTAGAGTGAGACCCTTCTTACCAGGGCAATCAAATGGACAATCTTCTGTAGATTATATAGGAGAAAATGGAAACATAATGATTGTGAATCCCCTTAAGCAGGGAAAAGATGCTAGAAGGGTATTTTCATTCAATAAGGTGTTTGCAACAAGTACCACACAAGAACAAATATATGCTGATACTCAACCATTGGTCAGATCCGTTTTAGATGGCTATAATGTATGCATCTTTGCATATGGACAGACTGGCTCAGGAAAAACGTACACGATGAGTGGCCCTGATCTGGTGACTGAAGAGACATGGGGTGTAAACTATAGGGCTTTGCGTGACTTATTTCATATATCAAACGAAAGAGCAGATGCCATAAAATATGAAGTTGGCGTCCAGATGATTGAAATATATAATGAACAAGTGAGAGATTTATTAGTCAGTGATGGCTCTAACAGAAGATATCCTTCAAGTCCATACTTTCTGTTTGTATACTACGCCATTTTTTCAATACTATATACATTAGATATACGAAACAACTCTCAATTGAATGGTCTTAATGTGCCTGATGCATGTTTAGTTCCAGTTAATTGTACTCAAGATGTTCTTGATTTAATGAAAATTGGTCAGAGGAACCGTGCTGTGGGTGCTACAGCTCTAAATGAGAGAAGCAGCCGTTCTCATAGTGTGTTGACAGTTCATGTCAGAGGGAGGGACTTAATTTCTAACTCCACTCTTAAGGGTTGTCTCCATCTTGTGGATTTGGCTGGAAGTGAGAGAGTGGACAAATCTGAGGCTGTTGGTGAGAGACTAAAGGAGGCCCAACATATTAATAAATCGCTTTCTGCACTTGGGGATGTTATCTCTGCTTTGGCACAGAAGAGTCCACATATTCCTTACAGAAATAGCAAACTTACACAAGTTTTACAAGATTCATTAGGTGGCCATGCTAAAACTTTGATGTTTGTTCATATAAATCCTGAACTCAACGCTCTTGGGGAGACAATTAGCACACTGAAGTTTGCTGAGAGGGTTGCATCCATTGAACTTGGGGCTGCTCAATCTAATAAAGAAACTGGTGAAATCAGAGAGCTAAAGGAAGAGATATCAAATATCAAATTGGCATTGGAGAGGAAGGAAACTGAACTGGAACAATGGAAATCTGGGAATGCACGAAATGCCACAGAATCTCAGAAACCAAGAGCTTTGTCACCATTTCGTTTGCCCAAAAATGGTAACAGTGGCAGCATGAAACCTGAGAATTGTCAAAGATCCATGGATGATAGAAGCACTGAGGCTAAAAGTTGTTCTTCGGGTAAGCAGAAAAGGTCAAGATTTCCCTCAACATTTATGGACAAAGATTCCATGCCAAAAATGTCTCTTCTGGCTGAAGAAAGATCAGTGAGCTCAGGGAAGGGTAGATCACCATCACCACCGGTCAGGCGATCAATATCCACTGATAGAGGGTCTGTCATTAAAAGCAAGGTCAAAAGTGACACAGCAGACAACCAACCAGTATTAAAGCATCCATTTCCAGCTAGAGTACCAGTAAATAAATCTCCTGTCACAATGTCAATGGTCCCTTCTACAGAGAATAACTCAAGGGTGTATGTGCATCCACAGGAGCCAGTGAGGCAGGATAACATTTCTGAAAGTCTCTTCAATCTCCAAAAGCTAAACTCCAGGAAAGTTCATCAAGAACATGAAGAGGAACAGTTCAAGCAAGCATCTGGTGTAGTAAGACAAGGCGGTATTAGGAAAAGCAAGGCTGACAATAAGGCCAAGGTCAAGCATCATCAGCAATTGCCCTTTAGGATTCGAAAGGCTGATCATATACCTACATCCATTCCTGACCTGGAAAATGCTGGTGAAATGACTGTGGAGGCACCTCGAAAGAGTGATTACTCTGAGCCAGAAAATGATCTTAGCTTTATAGAGTCTACGGTCAATGGTGTATTAAATCTTAAAAAGATACGTCAGAATAACTCAAGGAATTCTCAGAACCTTGAATCAAGAGGAACAATGAAAGCAACCGAGCCTTTGTTGTCTAGCAAAGTTGAAAACAAACTTTTAAATTGTTCAGAGTTCTATGAAGTTATTAAGCCAATGGCTAACTCTCTTGTAGAAGCTGTGCCTTTGACCATTCCAGAGCCACCATCCAGAAAGAAAGCTTCCATGGATCAGGCCAGAAAAAAAGATGCCCCTCAGAATTCTGTCACCTTTGTCTATCAAACCAAACTAGCAGAGTCATTTCGTAGTGTAGCAGTGACATGGTGCAAGAACCCCACAGAGCACTCCCTTTCCATGAGCGTGGAAAACCCTTCTGAGGAAAACAAGTATACCTGCAAGATTGATTTAGGATCAGGTCAATCTTGGGGGAAAAAGGGTCTCAAATCCTTTGAAATAGAAGGTGCAAGAGTGGATATTTTCTGGGATTTTCGACATGCAAAATTCTCCACAGGTCCTCAACCTTGCTCAGGGTATTATGTTGCCTTGGTTTACAAGAAAGAGGTACTTCTATTACTAGGAGATTTAGAGAAGGATGCTTATATAAGAACCAAATCAAAACCATCATCAGAAGAGGCTACATTGTTGTGCAAGAAAGAGAATGTGCATGGGAAGAAGATATTTTGTACCAGAGCCATGCTGGAAGAGGGTAAACCAGAACATGATGTTGTGATTGAGATTTCCCTTTCTGGGCCTGATGATCCAGAAATGTGGATTAGCATAGATGGGATGTTGGCCAGTAGAATAATGAACTTGAATTGGAAATTCAGAGGGAATGAAATAGTCATGGTGAATAATTTACCTGTTGAAATCTTTTGGGATGTACATGATTGGCTGTTCAATGACCTTGGTTCAGGCCCTGCCTTGTTTATTTTCAAGCCAGGCTTTTTGGAACCTACTAGGGATCCTAATAGCAGAGAATGCACACCAAGAAGTGAGGATAGCAGCAGACATGACTTAGTAGAGAAGAATCCATCCACCAGAAGTTTTTTTCATTTTCTATATGCTTGGAGAACGGATTGA 4449 0.4113 MPQESLSNSIFISPCKRGLNLKGSVFNNNEAMYIVTEESINDHELAQRKAEEAASRRNQASEWLRQMDDVAFSSLSKEPSEEEFSLSLRNGLILCNVLNKVNPGAVLKVLFLFFPLFPLSIFHAFSAPLISFSTPCLGIAMEKKIKVVENPVLAVQSAEGAAQSAIQYFENMKNFLDAVKDMKLLTFEVSDLEKGGSSSKVVDCILCLKGYYEWKLSGGVGVWRYGGTVRITSFPKGSHSSIVGSENADESLDESESSQYEQLLEFLHLSGEVSVEETKTANALAFLFDHLGLKLLLAYLREADGVEDLPLNAMVIDTLLRKVVRDFSALLASQGTQLGHFLKKMLKGDIGCLSKREFIEAITLYLNQRSSLASNDFSKFCTCGGKLDSTRHNVNYSAKHAEIIDAQQKQLEGIKYFFEEIKLEVKQIQSKWDQELSRLENHIKSLEVTSSSYHKVLEENRVLYNQVQDLKGAIRVYCRVRPFLPGQSNGQSSVDYIGENGNIMIVNPLKQGKDARRVFSFNKVFATSTTQEQIYADTQPLVRSVLDGYNVCIFAYGQTGSGKTYTMSGPDLVTEETWGVNYRALRDLFHISNERADAIKYEVGVQMIEIYNEQVRDLLVSDGSNRRYPSSPYFLFVYYAIFSILYTLDIRNNSQLNGLNVPDACLVPVNCTQDVLDLMKIGQRNRAVGATALNERSSRSHSVLTVHVRGRDLISNSTLKGCLHLVDLAGSERVDKSEAVGERLKEAQHINKSLSALGDVISALAQKSPHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPELNALGETISTLKFAERVASIELGAAQSNKETGEIRELKEEISNIKLALERKETELEQWKSGNARNATESQKPRALSPFRLPKNGNSGSMKPENCQRSMDDRSTEAKSCSSGKQKRSRFPSTFMDKDSMPKMSLLAEERSVSSGKGRSPSPPVRRSISTDRGSVIKSKVKSDTADNQPVLKHPFPARVPVNKSPVTMSMVPSTENNSRVYVHPQEPVRQDNISESLFNLQKLNSRKVHQEHEEEQFKQASGVVRQGGIRKSKADNKAKVKHHQQLPFRIRKADHIPTSIPDLENAGEMTVEAPRKSDYSEPENDLSFIESTVNGVLNLKKIRQNNSRNSQNLESRGTMKATEPLLSSKVENKLLNCSEFYEVIKPMANSLVEAVPLTIPEPPSRKKASMDQARKKDAPQNSVTFVYQTKLAESFRSVAVTWCKNPTEHSLSMSVENPSEENKYTCKIDLGSGQSWGKKGLKSFEIEGARVDIFWDFRHAKFSTGPQPCSGYYVALVYKKEVLLLLGDLEKDAYIRTKSKPSSEEATLLCKKENVHGKKIFCTRAMLEEGKPEHDVVIEISLSGPDDPEMWISIDGMLASRIMNLNWKFRGNEIVMVNNLPVEIFWDVHDWLFNDLGSGPALFIFKPGFLEPTRDPNSRECTPRSEDSSRHDLVEKNPSTRSFFHFLYAWRTD. 1483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g00151 1482 MobiDBLite consensus disorder prediction 895 912 - -
Seca8g00151 1482 MobiDBLite consensus disorder prediction 1059 1073 - -
Seca8g00151 1482 Gene3D - 40 222 IPR036872 -
Seca8g00151 1482 Coils Coil 828 855 - -
Seca8g00151 1482 SUPERFAMILY Calponin-homology domain, CH-domain 48 237 IPR036872 -
Seca8g00151 1482 MobiDBLite consensus disorder prediction 1446 1462 - -
Seca8g00151 1482 Pfam Plant protein of unknown function (DUF868) 1208 1480 IPR008586 -
Seca8g00151 1482 MobiDBLite consensus disorder prediction 1443 1462 - -
Seca8g00151 1482 MobiDBLite consensus disorder prediction 1043 1073 - -
Seca8g00151 1482 ProSiteProfiles Kinesin motor domain profile. 473 821 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca8g00151 1482 Pfam Kinesin motor domain 479 821 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca8g00151 1482 CDD KISc_C_terminal 471 823 - -
Seca8g00151 1482 ProSiteProfiles Calponin homology (CH) domain profile. 54 213 IPR001715 GO:0005515
Seca8g00151 1482 PANTHER KINESIN-LIKE PROTEIN KLP-3 61 959 IPR027640 GO:0003777|GO:0007018
Seca8g00151 1482 PRINTS Kinesin heavy chain signature 691 708 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca8g00151 1482 PRINTS Kinesin heavy chain signature 548 569 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca8g00151 1482 PRINTS Kinesin heavy chain signature 722 740 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca8g00151 1482 PRINTS Kinesin heavy chain signature 771 792 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca8g00151 1482 SMART ch_5 56 211 IPR001715 GO:0005515
Seca8g00151 1482 SMART kinesin_4 471 829 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca8g00151 1482 Coils Coil 429 449 - -
Seca8g00151 1482 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 474 858 IPR027417 -
Seca8g00151 1482 MobiDBLite consensus disorder prediction 943 974 - -
Seca8g00151 1482 MobiDBLite consensus disorder prediction 855 987 - -
Seca8g00151 1482 Gene3D Kinesin motor domain 415 823 IPR036961 -
Seca8g00151 1482 FunFam kinesin-like protein KIN-14F 468 862 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g00151 Seca-Chr8 1947376 1958498 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g00151 378 821 Calmodulin-binding Proteins AT5G65930 36.242 1.47e-71 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g00151 K10406 - gmx:100811516 1756.5