Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g00051 ATGGCTACACAAGCTCTAGTATCTTCATCATCTCTTACCTTCTCAGCTGAGGCTGCCAAACAGAGCCTTGGAGCAAGATCACTCCAATCTCCAATTGGGTTCTCCAAAAAATGTTCCTTTATTGTCAAGGCAGCTTCTACTCCTCCTGTCAAGCAAGGAGCAAATAGACCCTTGTGGTTTGCATCAAAGCAGAGTCTTTCTTACTTGGATGGAAGCCTTCCCGGTGACTATGGATTTGACCCTCTTGGACTTTCAGATCCAGAAGGAACAGGAGGGTTCATTGAGCCAAAATGGCTAGCATATGGTGAGATCATCAATGGTCGTTTTGCAATGTTGGGTGCAGCTGGTGCTATTGCACCTGAAATTCTTGGCAAGGCTGGTCTGATTCCAGAGGAAACAGCACTCCCATGGTTCAAAACCGGTGTGATTCCACCTGCAGGAACATACAGCTACTGGGCAGACCCTTACACATTGTTTGTGTTGGAGATGGCACTGATGGGATTTGCAGAGCACAGGAGATTCCAAGATTGGGCCAAACCAGGGTCTATGGGGAAGCAATACTTCTTAGGACTAGAGAAAGGTCTTGGAGGTTCAGGTGACCCAGCTTACCCTGGTGGACCTTTCTTTAACCCTCTTGGTTTTGGTAAGGATGAGAAATCCATGAAGGATTTAAAGCTGAAGGAAGTGAAGAATGGAAGGTTGGCCATGTTGGCAATATTGGGTTACTTTGTTCAAGGTCTTGTCACAGGTGTTGGGCCATACCAAAACCTCCTAGATCATCTGGCTGACCCTGTGAACAACAATGTCTTGACCAGTCTCAAGTTTCACTGA 831 0.4657 MATQALVSSSSLTFSAEAAKQSLGARSLQSPIGFSKKCSFIVKAASTPPVKQGANRPLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGEIINGRFAMLGAAGAIAPEILGKAGLIPEETALPWFKTGVIPPAGTYSYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLGGSGDPAYPGGPFFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH. 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g00051 276 Pfam Chlorophyll A-B binding protein 67 245 IPR022796 -
Seca8g00051 276 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 7 271 IPR001344 GO:0009765|GO:0016020
Seca8g00051 276 FunFam Chlorophyll a-b binding protein, chloroplastic 57 275 - -
Seca8g00051 276 SUPERFAMILY Chlorophyll a-b binding protein 55 272 - -
Seca8g00051 276 Gene3D Chlorophyll a/b binding protein domain 58 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g00051 Seca-Chr8 711360 714453 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g00051 19 276 Chloroplast and Mitochondria Gene Families AT1G61520 88.372 7.36e-169 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g00051 K08909 - gmx:100808379 518.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g00051 8 711360 714453 Seca8g00051 8 711360 714453 ECH