Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g00050 ATGTTTGGGTTTATGTTCACTGGAAAATGGATAGAGAGATCAAAAGGCTTGGAAAGATACCCGTGGCGCAAATGTTCTGATTTTATACCTAGAATGGGAGTTGGCCGTGAAGTCTCAATCTCCCTCGATGGAGTGAGGGACAAGAACATTATGCAGCTCAAGAAGCTCAATATTACTCTTTTCCCTGTTCGATACAATGACAAATACTATGCTGATGCTCTTGCTTCCGGGGAATTCACTAAACTAGCTTACTACAGTGATATTTGTGTCGGTGCAATTGCATGCCGGCTTGAGAAGAAGGAAGGTGGGGGGCAAGTTCGGGTTTATATCATGACTTTAGGTGTCTTAGCACCTTACCGTGGTCTTGGTATTGGTACAAAGCTATTGAATCATGTTCTTGATCTTTGCTCTAAGCAAAACATTTCTGAGGTTTACTTGCATGTGCAGACGAACAATGAAGACGCCATAAACTTTTATAAGAAATTTGGGTTTGAAATTACAGAAACAATCCATAACTATTATACAAATATCACACCACCAGACTGCTTTGTTCTCACGAGGCATACACTTCCAAGCCCCATGAAGAAATAA 591 0.4078 MFGFMFTGKWIERSKGLERYPWRKCSDFIPRMGVGREVSISLDGVRDKNIMQLKKLNITLFPVRYNDKYYADALASGEFTKLAYYSDICVGAIACRLEKKEGGGQVRVYIMTLGVLAPYRGLGIGTKLLNHVLDLCSKQNISEVYLHVQTNNEDAINFYKKFGFEITETIHNYYTNITPPDCFVLTRHTLPSPMKK. 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g00050 196 FunFam Putative n-alpha-acetyltransferase 50 37 190 - -
Seca8g00050 196 CDD NAT_SF 82 147 - -
Seca8g00050 196 PANTHER N-ALPHA-ACETYLTRANSFERASE 36 188 - -
Seca8g00050 196 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 40 191 IPR000182 GO:0016747
Seca8g00050 196 Pfam Acetyltransferase (GNAT) family 80 164 IPR000182 GO:0016747
Seca8g00050 196 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 48 185 IPR016181 -
Seca8g00050 196 Gene3D - 36 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g00050 Seca-Chr8 707203 711319 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Seca8g00050 Acetyltransf_1 1.2e-15 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g00050 K20793 - gmx:100499961 314.309