Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g00041 ATGATGAAGAATAATCAGCCACACATCGCATGGATTTTTTTATTTCTAGTTCTTCTTCCATCTCTAGTTGTCGGTGACTCCAACTGCACATGTGTAAAAGATGAAGAATCTGGTGACAAGAGTCTAGCACTGAAATACAAATTAATTGCTCTTGCTTCCATTCTGGTTGCAAGTGCAATTGGTATCACACTTCCAATGATGGGCAAAACTTTCTCTGCCTTACGTCCTGAAAAAGACTTTTTCTTCATGGTGAAGGCCTTTGCAGCTGGTGTTATATTATCCACTGGATTCATCCATGTTTTGCCTGATGCATTTGAAAAGTTAACATCTCCATGTCTTAGTGACCATCCATGGGGACATTTTTCATTCACAGGATTTGTGGCAATGTTATCAGCAATTGGAACACTTATGATTGATTCTCTTGCAACTGCATATTTTAATAAGTCTCACTTTAATAATAAGGAAGATCAAGAAAACGGTGAGGAACAAGGAAATAATATGCCTGTCCATACTCATGCAACTCATGGTCATGCTCATGGTTCAACTTCTGCTTCAACACAGCTTCGCCATAGGGTTATTTCTCAGGTGTTAGAGTTAGGGATTGTGGTGCACTCTGTAATAATAGGGATCTCTTTAGGTGCATCGGAGAGTCCTAAGACAATAAGGCCTCTTATTGCTGCTTTAACTTTCCATCAATTTTTTGAAGGCATGGGACTTGGTGGTTGCATCTCACAGGCAAAATTCAGGACCAAAGCAGTTATAATTATGGCATTGTTCTTTTCATTGACAACACCAGTAGGAATAGCCATCGGTATATGGATTACTAATGATTACAGTGAGAATAGCCCAACTGCTCTCATTGTGGAAGGGATTCTTAATGCAGCATCAGCCGGGATTTTAATTTACATGTCTCTAGTGGATCTTCTTGCAGCTGATTTTATGCATCCAAAATTTCAGGAGAGTGGTAGGCTTCAAATAGGAGTCAATATATCTCTTCTTATAGGGGCCGGTTATATGTCACTTTTAGCTAAATGGGCCTAA 1041 0.3939 MMKNNQPHIAWIFLFLVLLPSLVVGDSNCTCVKDEESGDKSLALKYKLIALASILVASAIGITLPMMGKTFSALRPEKDFFFMVKAFAAGVILSTGFIHVLPDAFEKLTSPCLSDHPWGHFSFTGFVAMLSAIGTLMIDSLATAYFNKSHFNNKEDQENGEEQGNNMPVHTHATHGHAHGSTSASTQLRHRVISQVLELGIVVHSVIIGISLGASESPKTIRPLIAALTFHQFFEGMGLGGCISQAKFRTKAVIIMALFFSLTTPVGIAIGIWITNDYSENSPTALIVEGILNAASAGILIYMSLVDLLAADFMHPKFQESGRLQIGVNISLLIGAGYMSLLAKWA. 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g00041 346 PANTHER ZINC/IRON TRANSPORTER 43 341 - -
Seca8g00041 346 MobiDBLite consensus disorder prediction 162 182 - -
Seca8g00041 346 Pfam ZIP Zinc transporter 45 343 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Seca8g00041 346 NCBIfam ZIP zinc/iron transport family 31 346 IPR004698 GO:0005385|GO:0016020|GO:0071577
Seca8g00041 346 MobiDBLite consensus disorder prediction 153 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g00041 Seca-Chr8 618921 622756 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g00041 12 346 Inorganic Solute Cotransporters AT3G12750 55.814 3.00e-132 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g00041 K14709 - qsu:112037227 452.595