LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca8g00041	ATGATGAAGAATAATCAGCCACACATCGCATGGATTTTTTTATTTCTAGTTCTTCTTCCATCTCTAGTTGTCGGTGACTCCAACTGCACATGTGTAAAAGATGAAGAATCTGGTGACAAGAGTCTAGCACTGAAATACAAATTAATTGCTCTTGCTTCCATTCTGGTTGCAAGTGCAATTGGTATCACACTTCCAATGATGGGCAAAACTTTCTCTGCCTTACGTCCTGAAAAAGACTTTTTCTTCATGGTGAAGGCCTTTGCAGCTGGTGTTATATTATCCACTGGATTCATCCATGTTTTGCCTGATGCATTTGAAAAGTTAACATCTCCATGTCTTAGTGACCATCCATGGGGACATTTTTCATTCACAGGATTTGTGGCAATGTTATCAGCAATTGGAACACTTATGATTGATTCTCTTGCAACTGCATATTTTAATAAGTCTCACTTTAATAATAAGGAAGATCAAGAAAACGGTGAGGAACAAGGAAATAATATGCCTGTCCATACTCATGCAACTCATGGTCATGCTCATGGTTCAACTTCTGCTTCAACACAGCTTCGCCATAGGGTTATTTCTCAGGTGTTAGAGTTAGGGATTGTGGTGCACTCTGTAATAATAGGGATCTCTTTAGGTGCATCGGAGAGTCCTAAGACAATAAGGCCTCTTATTGCTGCTTTAACTTTCCATCAATTTTTTGAAGGCATGGGACTTGGTGGTTGCATCTCACAGGCAAAATTCAGGACCAAAGCAGTTATAATTATGGCATTGTTCTTTTCATTGACAACACCAGTAGGAATAGCCATCGGTATATGGATTACTAATGATTACAGTGAGAATAGCCCAACTGCTCTCATTGTGGAAGGGATTCTTAATGCAGCATCAGCCGGGATTTTAATTTACATGTCTCTAGTGGATCTTCTTGCAGCTGATTTTATGCATCCAAAATTTCAGGAGAGTGGTAGGCTTCAAATAGGAGTCAATATATCTCTTCTTATAGGGGCCGGTTATATGTCACTTTTAGCTAAATGGGCCTAA	1041	0.3939	MMKNNQPHIAWIFLFLVLLPSLVVGDSNCTCVKDEESGDKSLALKYKLIALASILVASAIGITLPMMGKTFSALRPEKDFFFMVKAFAAGVILSTGFIHVLPDAFEKLTSPCLSDHPWGHFSFTGFVAMLSAIGTLMIDSLATAYFNKSHFNNKEDQENGEEQGNNMPVHTHATHGHAHGSTSASTQLRHRVISQVLELGIVVHSVIIGISLGASESPKTIRPLIAALTFHQFFEGMGLGGCISQAKFRTKAVIIMALFFSLTTPVGIAIGIWITNDYSENSPTALIVEGILNAASAGILIYMSLVDLLAADFMHPKFQESGRLQIGVNISLLIGAGYMSLLAKWA.	347

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca8g00041	346	PANTHER	ZINC/IRON TRANSPORTER	43	341	-	-
	Seca8g00041	346	MobiDBLite	consensus disorder prediction	162	182	-	-
	Seca8g00041	346	Pfam	ZIP Zinc transporter	45	343	IPR003689	GO:0016020\|GO:0030001\|GO:0046873\|GO:0055085
	Seca8g00041	346	NCBIfam	ZIP zinc/iron transport family	31	346	IPR004698	GO:0005385\|GO:0016020\|GO:0071577
	Seca8g00041	346	MobiDBLite	consensus disorder prediction	153	182	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca8g00041	Seca-Chr8	618921	622756	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Seca8g00041	12	346	Inorganic Solute Cotransporters	AT3G12750	55.814	3.00e-132	380

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca8g00041	K14709		-	qsu:112037227	452.595

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