Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g08557 ATGGAATCTGATGTAGAAGATCAGTTTTCAGAAGCATATGCTATTGAATTTGAAGAAGCTGGTCTTGCAATATCTGCAGCATCCCGGTTACTAACAAGACTACTGGATTGTGAGCAGTTTCGTCATAAAATAAATTTCTCCCATTTTATTGGTATGCTTCGTGAAATTCTCAGGTCCAATATTCCCCTCCACAACAAAGATTGGGTAGCTGCTTGCCTAGTTAAATTAAGTTCTCTCTCTGATCACAACATGAGTTTTAATCCAATCAATGTTGAAGTTACACTTTATGAGACAATCCCAAGACTTGTAGAACAGATCAAAACTTCATTCTCACCAGAGGCACAGGAAGATGCTGTTGTAGAACTTAATAGAATAATATCTGAAGGAGTGGTAGATTCCACAGAAGCTATTATTTCTGGGGGTGCAGTATATCCATTGGTGAAGCTGATTGAAGATGGCAGTGAAAGGGCTGTTGAAGCAAGCTTGGCAATACTGTATAATCTGAGTATGGACAGTGAGAACCATTCTGCACTTGTGGCCGCTGAAGCAGTCCCAGCCTTAAGAAGATTTGTTCTATCACACAGACCACAGTGGGAAAAGGCACTTCTTTTATTAAGGAGTTTGCAAATGTGA 633 0.3981 MESDVEDQFSEAYAIEFEEAGLAISAASRLLTRLLDCEQFRHKINFSHFIGMLREILRSNIPLHNKDWVAACLVKLSSLSDHNMSFNPINVEVTLYETIPRLVEQIKTSFSPEAQEDAVVELNRIISEGVVDSTEAIISGGAVYPLVKLIEDGSERAVEASLAILYNLSMDSENHSALVAAEAVPALRRFVLSHRPQWEKALLLLRSLQM. 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g08557 210 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 141 183 IPR000225 GO:0005515
Seca7g08557 210 SUPERFAMILY ARM repeat 26 208 IPR016024 -
Seca7g08557 210 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 209 - -
Seca7g08557 210 Gene3D - 18 209 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g08557 Seca-Chr7 190515724 190516356 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g08557 138 197 U-box Gene Family AT3G54850 35.000 6.60e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g08557 - - gmx:100793128 322.013