Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g08541 ATGGACAAAAAGTCGTCGAGCTTCTCATCAAGAAACAACAGCCAACAATGGGAAGGAGAAAAGGAAGATCTCCCACAGGTTCTGGAGGAGGTGGATCGTTTTCTCCATAGCACAACTGCAGGAGAAGTTCCAGATTGCGTTCTGGTGTTGGCCAGATTGTTGGATTCTTTGATAGATAAATACAACAGGGGCAAGAGAAGCAAGTTTGGGCAGGAGCCAGAGGATGACAAGTTCCTTCTAGATGCCGTGGATCGCATCTCCAAGCTATCCGGATCCGCCTCTTTGGATAAAACTAGCTCCGTGCTAGAAAAAGCAATATCTTTTCTAGAGAATGACCTCTGCGCTCTTCTGCAGGATCCCGAATCCAAGACATCTAACAAGTCATCCTCATTTGGTTCCGACTCTGATCTGTGTGCCATTCCTGAGAACGACTCCCCTGGGGCCAGGGCCAGGGCCAGGGCCAGGCCTAACCAAGATGATGAGGGTACTGAGGAGGATGAGGATAAGGATGGGGACTTGCCAACTTTCTCTACAGAGAAACTTTCCATTCTGAACAAGATCGCCACCGCTATGATCACCGCGGGCTATCAAACAGAGTGTTGCATGGCCTTTGTTAATTTCAGGCGAAACGCATTCAAAACCGCGTTGCATAATTTCGGATACGCGAGAGTAACAATGGAGGAGGTTTATAGAATGCAATGGGAATCTCTGGAAGGAGAAATTGCCACGTGGAACAAAGTGGTTCGGCATTGTACCACCGTGCTCTTCAACGCGGAAAGAAGGCTCTATGATTCCGTTTTCCCCAATCAACCGTCCATATCGCAGATCCTGTTCAGTGATCTTGCACGGGCTGTCATCATCCATTTCATGAATTTCGCGCAAGCGGTGGTTTTAACGAAACCGTCGCCGGAGAAACTATTCAAATTCCTGGATATGTACGAGACCCTGAGGGACATGGAGCCTGGCATTCTTAACGATTCGTATCCAGAGCGGTGTGCCAAGGAGCTTGCATACGAGACAGCCATAGCAAAGGATAGGGTAGTAGAGGCTGCCGTGGCCATGTTCTGTGATTTGGAAAACTCCATTAAGAGTGATAATGAACGGATTCCAGTCCCCAATGGCGCAGTTCACCCATTGACTCGCTATGTCATGAATTATCTTAAATATGCGTGCGAGTATAAAGACACATTGGAGCAGGTGTTTCTTACGGTTAAGGTTAAGGATAATAACAATAACAGTAACACCGCACATCATGATCAATTAGTAGTCGAAGATGGAACGCCTAAGAATTCACCTTTTGCGGTTCAATTGATGACAATCATGGATCTTTTGGATGCAAATGTGGAAAGGAAGTCCAATCTGTATAGGAATCCAGCTTTACGCTATGTTTTTCTAATGAACAATGGGAGATACATGGTGCAGAAGGTGAAAGGAAGCGCGGAGCTTCACGAATCAATGGGTGACAATTGGTGCAGGAAGAGGCAATCGAGTCTGAGGTTGTACCATAAGAGTTATCAGAGAGAGACATGGAGCAAGGTGCTGCAGTGCCTTAACCCGGAGGGTCTGCAGGGGAGTGGGAACAAGGTGTCGAAACAAGTTATCAAAGAGAGGTTCAAGTGTTTCAGTGGCATGTTTGAAGAAATACACAAGACACAGAGTAATTGGATGGTGAGTGATGAGCAACTTCAGACGGAGCTCAGGGTTTCAATATCGGGGTTGGTGATCCCAGCGTACCGCTCTTTTCATGGAAGATTCAAACACCATATAGAATCAGGTAGACATCTTGACAAGTATATCAAGTATCATCCCGAAGACATAGAGACTTTGATTGACGATTTCTTTGCTGGAAATTCCACCTCCATGGCCCGGAGGAGAACATGA 1881 0.4652 MDKKSSSFSSRNNSQQWEGEKEDLPQVLEEVDRFLHSTTAGEVPDCVLVLARLLDSLIDKYNRGKRSKFGQEPEDDKFLLDAVDRISKLSGSASLDKTSSVLEKAISFLENDLCALLQDPESKTSNKSSSFGSDSDLCAIPENDSPGARARARARPNQDDEGTEEDEDKDGDLPTFSTEKLSILNKIATAMITAGYQTECCMAFVNFRRNAFKTALHNFGYARVTMEEVYRMQWESLEGEIATWNKVVRHCTTVLFNAERRLYDSVFPNQPSISQILFSDLARAVIIHFMNFAQAVVLTKPSPEKLFKFLDMYETLRDMEPGILNDSYPERCAKELAYETAIAKDRVVEAAVAMFCDLENSIKSDNERIPVPNGAVHPLTRYVMNYLKYACEYKDTLEQVFLTVKVKDNNNNSNTAHHDQLVVEDGTPKNSPFAVQLMTIMDLLDANVERKSNLYRNPALRYVFLMNNGRYMVQKVKGSAELHESMGDNWCRKRQSSLRLYHKSYQRETWSKVLQCLNPEGLQGSGNKVSKQVIKERFKCFSGMFEEIHKTQSNWMVSDEQLQTELRVSISGLVIPAYRSFHGRFKHHIESGRHLDKYIKYHPEDIETLIDDFFAGNSTSMARRRT. 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g08541 626 Gene3D Exocyst complex component Exo70 64 624 - -
Seca7g08541 626 MobiDBLite consensus disorder prediction 122 136 - -
Seca7g08541 626 MobiDBLite consensus disorder prediction 122 175 - -
Seca7g08541 626 MobiDBLite consensus disorder prediction 1 23 - -
Seca7g08541 626 SUPERFAMILY Cullin repeat-like 74 614 IPR016159 -
Seca7g08541 626 PANTHER EXOCYST COMPLEX PROTEIN EXO70 28 615 IPR004140 GO:0000145|GO:0006887
Seca7g08541 626 Pfam Exo70 exocyst complex subunit 243 612 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g08541 Seca-Chr7 190256858 190258738 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g08541 24 625 EXO70 exocyst subunit family AT5G13150 49.137 0.0 577
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g08541 K07195 - gmx:100784339 789.645