Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g08533 ATGGGATCGTGTCTCTCGGCGGCGGGGGCTTCACCTCCGCTTCCTCTTCCTTCTCCATCTTCCTCTTCTCAATCACCCGCTGCCACATCTTCACTTTCCTCTGATTCCGGTATGGAAATTCGGTTGCACAGAGTCCCTGGCAGACTCTTCTTGAATGGTTCCTCCCAGATTGCATCCTTGTTCTGTAAGCAAGGCAGAAAAGGGATCAATCAGGATGCTATGCTTCTTTGGGAGAACTTTTGTTCGAAGGAGGGCACCATTTTTTGCGGTGTTTTTGATGGGCATGGACCTTGTGGTCACGTGGTTGCCAAGAAAGTCAGGGATTCTTTCCCTTTAAAGCTCATTGCTCAATTGGATTTGCAACCTAACAACGCAAATTGTGACAAACCCACCAATATTAATTTTGTGACACTCAGGGAATCCATTTTGAAGGCTTGTAAGGCTATGGACAAAGAACTGAAATTGCACCTTCAAATTGATTGCTATTGCAGTGGGACTACAGCAGTCACCTTGATCAAACAGGGGCACGACCTTGTTATTGCCAATGTAGGGGACTCAAGAGCTGTATTGGGTACCCGAGATCAACATGATTCTCTCATTGCTCTTCAGTTGACCACTGATCTTAAGCCAAATCTTCCAAGGGAAGCAGAGAGGATAAGGCTTTGTAAAGGAAGGGTGTTTTCCCTTCGGAATGAACCACATGTTGCTCGAGTTTGGCTGCCTAACGTTGATTCACCAGGCCTGGCTATGGCACGGGCCTTTGGAGATTTTTGCCTCAAGGACTTTGGGGTGATATCTGTTCCTGAGGTCTCACATCACCGCCTCACTGACAAGGATGAATTTGTTGTATTAGCCACAGATGGGGTTTGGGATGTTTTATCAAACACAGAAGTGGTGGGTATTGTGGCATCTGCTCCAAGGTCTTGTGCAGCTAGAATACTGGTTGAATCAGCTGCTCAAGCATGGAAGACCAAGCTTCCCACTTCAAAGGCAGATGATTGCTCTGTAGTTTGCCTCTTCTTTGATTCAAATTCAGACCTTAAATCACCAAACCATAATAAGGATGACATCAATTGA 1077 0.4605 MGSCLSAAGASPPLPLPSPSSSSQSPAATSSLSSDSGMEIRLHRVPGRLFLNGSSQIASLFCKQGRKGINQDAMLLWENFCSKEGTIFCGVFDGHGPCGHVVAKKVRDSFPLKLIAQLDLQPNNANCDKPTNINFVTLRESILKACKAMDKELKLHLQIDCYCSGTTAVTLIKQGHDLVIANVGDSRAVLGTRDQHDSLIALQLTTDLKPNLPREAERIRLCKGRVFSLRNEPHVARVWLPNVDSPGLAMARAFGDFCLKDFGVISVPEVSHHRLTDKDEFVVLATDGVWDVLSNTEVVGIVASAPRSCAARILVESAAQAWKTKLPTSKADDCSVVCLFFDSNSDLKSPNHNKDDIN. 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g08533 358 PANTHER PROTEIN PHOSPHATASE 36 339 IPR015655 GO:0004722|GO:0006470
Seca7g08533 358 Pfam Protein phosphatase 2C 64 304 IPR001932 -
Seca7g08533 358 SMART PP2C_4 48 339 IPR001932 -
Seca7g08533 358 MobiDBLite consensus disorder prediction 21 35 - -
Seca7g08533 358 Gene3D - 53 349 IPR036457 -
Seca7g08533 358 ProSiteProfiles PPM-type phosphatase domain profile. 57 341 IPR001932 -
Seca7g08533 358 SUPERFAMILY PP2C-like 55 343 IPR036457 -
Seca7g08533 358 CDD PP2Cc 56 341 IPR001932 -
Seca7g08533 358 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g08533 Seca-Chr7 190188605 190191375 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g08533 36 345 PP2C-type Phosphatase Gene Family AT1G16220 56.932 2.49e-141 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g08533 - - gmx:100816114 471.47