Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g08507 ATGGAAAATGAGCTGAAGCAACGCAAAACAGGAGTCCACCGAAAACGAGCTCCTCGCCCAACCACAACTGCCAGGCCTGAACAGCTTGATGAGATTTCTGGGGAGGAAAAAACTGATACTGACAAAAACATGGCAACCATGTTTGAAATCTTGAGGAAAATGAAACATGTCCCACTTGAAAACCTGATTTTCAACAGGATTTCTTTTGCTCAGACTGTGGAAAACTTGTTTGCCCTATCATTCTTAGTGAAAGATGGTCGTGCCGAGATCAGTCTCGATGAAAATCGTTTGCACTATGTTTCTCCTAAAAATGCTCCTGCTGCCAACTCTGTAATGTCAAAAGAAGTTTCTTACACTCATTTTATGTTCAGATATGATTACCAAGATTGGAAGTTAATGAAGGATATTGTGCCTGAGGGCAAGGAGCTAATGCCACATAGGATTCAATTTTGCACTGTGATCAACTCTCAGACTCAGGCAGAGATGGGTGGTGACAATTCCCAACCAGCTTTGGCTGTAACACCAATCAGGAAGCTATCACGGAATCGAGGGTTGGTTGTCCAGGAGGAAGCTGTTGTAGAAGAATCTCCTGAATGTGATGACGAAAATGCTTCCAAAGCTGCTGCAATCCGTCGGTGTAGGCGTAAGCTTCATTAA 657 0.4338 MENELKQRKTGVHRKRAPRPTTTARPEQLDEISGEEKTDTDKNMATMFEILRKMKHVPLENLIFNRISFAQTVENLFALSFLVKDGRAEISLDENRLHYVSPKNAPAANSVMSKEVSYTHFMFRYDYQDWKLMKDIVPEGKELMPHRIQFCTVINSQTQAEMGGDNSQPALAVTPIRKLSRNRGLVVQEEAVVEESPECDDENASKAAAIRRCRRKLH. 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g08507 218 Pfam Nse4 C-terminal 57 139 IPR014854 -
Seca7g08507 218 PANTHER UNCHARACTERIZED 1 202 IPR027786 GO:0005634|GO:0006281|GO:0030915
Seca7g08507 218 MobiDBLite consensus disorder prediction 1 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g08507 Seca-Chr7 189905364 189907781 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g08507 1 217 Non-SMC Element family AT1G51130 53.917 5.10e-74 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g08507 K22825 - gmx:100792117 337.421