Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g08506 ATGAGGGAGGTTGTGGGTTTGGTGTTAGCCATGTTGGCAATTGGGTTAAGCTTGACAATCTTGATGGAACGTAGAACAACGCATAAGCTTCCACCAGGACCAACATGTTGGCCAGTGGTTGGCAACATTTTCCAACTGGGTTGGTCACCCCACGAGTCCTTTGCAAAACTCGCTCGCAAACATGGTCCTATCATGACCCTTTGGTTAGGTTCCATGTGCACAGTGGTTATCTCCTCCAGTGAAGTGGCTCGTGAAATGTTCAAACACAACGACGTCGTTCTCGCTGGTAGGAAGATTTATGAGGCCATGAAAGGGGACCATGGCACTGAAGGCTCTCTCATCACTTCTCAATACAACGCACACTGGCGCATGCTTAGGCGCTTGTGCACCACTGAGTTCTTTGTCACCACTCGTTTAGATTCCATGCGAGGTGTGCGAGCAAAATGTATACACCGCATGGTACACTTGATTGAAGAAGCTTCTGTTGAAGAATCTTGCACTTGTGGTGGTGTTGATGTTGGGAGGTTCTTTTTCTTGATGGCTTTTAACCTTATTGGGAACCTCATTTTTTCAAAGGATTTGTTGGATCCTGAGATGGAGAAAGGGGCTAGATTTTATTACCATGCCGTTAAGGTTATGGAGTATGCTGGGAAGCCTAATGTGGCAGATTTCTTCCCAATTTTGAAGTGGCTTGACCCTCAACGTATAAGGAGAAAGACACAATTCCATGTTGAGAGAGCCTTTGAGATAGCAGGATGGTTTATCAAACAAAGGATGGAAAATGGTTGCAATGGAAAGGATTCCAAAGATTTCTTGGATGTCTTGTTGGAGTTTCGTGGGGATGGTGTCAGTGGGCCCTATACCTTTTCTCCAAGAACTATTAATGTTGTTGTCTTTGAAATGTTCACAGCAGGGACAGACACGACAACAAGCACAATGGAATGGGCCATGGCAGAGCTTCTGCATAACCCGAGAACGGTAAAGAAGGTGCAGATGGAGCTAAGGAGCAAAATAGGGGCAAATAGGAATATTGAAGAAAAGGACATAGAGAATCTTATTTACCTCAAAGCAGTGATCAAGGAAACACTGAGGCTTCATCCACCTCTTCCTTTTTTGGTTCCACACATGGCCTTGGACTCTTGCAAGATGCTAGACTACTATATTCCCAAAGAATCACAGATTTTAGTGAATGTTTGGGCAATTGGGAGGGACCCAAAAGTGTGGGATGCTCCCTTGTTGTTCTGGCCAGAAAGGTTTTTGGAGCCAAACATGGTGGATTACAAGGGACACCATTTTGACTTTATCCCTTTTGGTTCAGGTCGGAGAATGTGCCCAGCTATGCCACTAGCATCTCGCGTGCTTCCCTTGGCACTGGGCTCCCTTCTGCACTCGTTTGATTGGGTTTTGCCAGGTGGCCTTAAATCAGAGGAGATGGACATGACAGAGGGAATGGGAATAACGCTTAGAAAAGTTGTTCCTTTGAAAGTCATCCCAGTGCCTTTAAGAGGAACTCCAGTTGCAAGATGA 1527 0.4558 MREVVGLVLAMLAIGLSLTILMERRTTHKLPPGPTCWPVVGNIFQLGWSPHESFAKLARKHGPIMTLWLGSMCTVVISSSEVAREMFKHNDVVLAGRKIYEAMKGDHGTEGSLITSQYNAHWRMLRRLCTTEFFVTTRLDSMRGVRAKCIHRMVHLIEEASVEESCTCGGVDVGRFFFLMAFNLIGNLIFSKDLLDPEMEKGARFYYHAVKVMEYAGKPNVADFFPILKWLDPQRIRRKTQFHVERAFEIAGWFIKQRMENGCNGKDSKDFLDVLLEFRGDGVSGPYTFSPRTINVVVFEMFTAGTDTTTSTMEWAMAELLHNPRTVKKVQMELRSKIGANRNIEEKDIENLIYLKAVIKETLRLHPPLPFLVPHMALDSCKMLDYYIPKESQILVNVWAIGRDPKVWDAPLLFWPERFLEPNMVDYKGHHFDFIPFGSGRRMCPAMPLASRVLPLALGSLLHSFDWVLPGGLKSEEMDMTEGMGITLRKVVPLKVIPVPLRGTPVAR. 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g08506 508 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g08506 508 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g08506 508 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g08506 508 Gene3D Cytochrome P450 22 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g08506 508 FunFam Cytochrome P450 76C4 22 497 - -
Seca7g08506 508 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 11 499 - -
Seca7g08506 508 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g08506 508 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g08506 508 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g08506 508 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g08506 508 PRINTS E-class P450 group I signature 58 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g08506 508 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g08506 508 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g08506 508 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g08506 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Seca7g08506 508 CDD CYP76-like 58 498 - -
Seca7g08506 508 Pfam Cytochrome P450 31 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g08506 508 SUPERFAMILY Cytochrome P450 31 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g08506 Seca-Chr7 189903239 189905245 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g08506 3 504 Cytochrome P450 AT3G52970 62.261 0.0 637
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g08506 - - tpra:123898388 829.32