Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g08475 ATGACCCTGGCCTTATATTTATTGCAAGGTTGTGTTTTTTTTTTTCATAATATATTCGATGATCACACTATCTCTATTATCTATCCTTGTATTTTTTGGATGCAGGGATTGCAAGACAATATACAATTGGTTCCAATTGATCTAAAAGATAGGCCTTCCTGGTATAAGGAGAAAGTCTACCCACCCAACAAGGTTCCATCTTTGGAACACAATAATGAAGTGAGAGGAGAGAGTCTTGATCTGATGAAATATATTGACAGTCACTTTGAAGGGCCTTCCCTTTTCCCTAGTGGTCCTGATAAGGAGTTTGCTGAAGAGTTGCTTTCTTACACTGATACCTTTTACAAGACCGTTACTTCTTCATTTAAAGGAGATGTGACTGAAGCCGGCACTGCATTTGATTACCTTGAAACTGCTCTCTCCAAATATGATCATGGACCTTTCTTCCTTGGCCAGTTCAGTCTAGTGGATATAGCATATGTTCCTTTCATTGAAAGATTTCAACCATTTTTAATGGATGTGAAAAATTATGATATTAAAGTCGGCAGGCCTAAACTAGCAGCGTGGATAGAGGAGATGAACAACATTGATGGCTACAAAATAACCCGTTCTGATCCCAAGGAGCTTGTGGAAAGCTACAAGAAGCGCTTCCTGGATAATCCATGA 666 0.3889 MTLALYLLQGCVFFFHNIFDDHTISIIYPCIFWMQGLQDNIQLVPIDLKDRPSWYKEKVYPPNKVPSLEHNNEVRGESLDLMKYIDSHFEGPSLFPSGPDKEFAEELLSYTDTFYKTVTSSFKGDVTEAGTAFDYLETALSKYDHGPFFLGQFSLVDIAYVPFIERFQPFLMDVKNYDIKVGRPKLAAWIEEMNNIDGYKITRSDPKELVESYKKRFLDNP. 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g08475 221 Pfam Glutathione S-transferase, N-terminal domain 41 92 IPR004045 -
Seca7g08475 221 SUPERFAMILY GST C-terminal domain-like 89 217 IPR036282 -
Seca7g08475 221 Gene3D - 91 220 - -
Seca7g08475 221 Pfam Glutathione S-transferase, C-terminal domain 126 191 - -
Seca7g08475 221 PANTHER GLUTATHIONE S-TRANSFERASE L1 34 217 IPR044629 GO:0004364
Seca7g08475 221 CDD GST_C_Lambda 101 214 - -
Seca7g08475 221 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 71 217 IPR010987 -
Seca7g08475 221 Gene3D Glutaredoxin 30 90 - -
Seca7g08475 221 FunFam Lambda class glutathione S-transferase 91 220 - -
Seca7g08475 221 SUPERFAMILY Thioredoxin-like 35 94 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g08475 Seca-Chr7 189468537 189471928 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g08475 17 216 Glutathione S-transferase Gene Family AT3G55040 61.611 3.76e-86 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g08475 K00799 - ming:122093307 301.982