Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g08474 ATGATATCAGCTACAATTAGGCGAATTGTGTCACCCTGTTGGAGACCATCTGATGAGGGTGAAAATTCTTGTAGAAATGGGGATGCAAGTGGACGTTATAATGGTTTGTTGTGGTATAAAGATTATGGAAGACATGCCAATGGTGAATTCTCAATGGCAGTTGTTCAAGCAAACAATTTGTTGGAGGATCAAAGCCAACTTGAATCAGGCCCCATAAGCTCACATGCAGGAAGTCCTCAAGGAACTTTTGTTGGAATATATGATGGGCATGGAGGTCCAGAAGCTTCCCGGTTTGTCAATGACCACCTATTTAAAAATATCAAGAAATTCACTTCAGAAAATCAAGGAATGTCAGCTGATGTTATCAACAAAGCATTCTTGGCAACAGAAGAAGAGTTCCTTTCTCTTGTAAAGAAGCAGTGGCTACACAAGCCTCAGATTGCGTCGGTTGGATCTTGCTGTTTGATAGGCATAATATATAGTGGGGAGCTCTATATTGCAAATGCAGGAGACTCTCGAGCTGTGTTAGGTAGAATGGATGAGGCTACCAAAGAGGTTAAAGCAATTCAACTATCCTCTGAGCATAATGCTAGCCTGGAATCTGTCAGAGAGGAGTTGCGCTCATTGCATCCTGATGATCCGCAGATTGTAGTGATGAAGCACAAGGTCTGGCGAGTGAAGGGTCTGATTCAGGTTTCAAGATCCCTTGGCGATGCCTATCTAAAGAAGGCAGAGTTTAACAAAGCACCACTATTGGCCAAGTTTCGACTCTCAGAACCCTTTGAGCAGCCAATCCTTAAAGCCGAACCAACAGTACTAGTACAGAAACTCCGTCCTCAAGATCATTTTCTTATATTTGCATCAGATGGGTTATGGGAGCATGTGAGCAATCAAGAAGCAGTTGACATTGTTCATAACTATCCACGTAATGGAGTAGCGAAGAAACTTATCAAAACTGCACTATGTGCAGCTGCAAAGAAAAGAGAGATGAGATACTCAGACTTGAAAAAGATTGATCGTGGGGTGAGGAGACATTTTCATGATGACATCACGGTTATAGTTTTGTATCTTGATTCACATTTAATTAGCCGTTGTTATTCACGTTGTCCAACCGTTTCCATCAAAGGAGGTGGTGATTTTGGTATTCTGTAA 1152 0.4184 MISATIRRIVSPCWRPSDEGENSCRNGDASGRYNGLLWYKDYGRHANGEFSMAVVQANNLLEDQSQLESGPISSHAGSPQGTFVGIYDGHGGPEASRFVNDHLFKNIKKFTSENQGMSADVINKAFLATEEEFLSLVKKQWLHKPQIASVGSCCLIGIIYSGELYIANAGDSRAVLGRMDEATKEVKAIQLSSEHNASLESVREELRSLHPDDPQIVVMKHKVWRVKGLIQVSRSLGDAYLKKAEFNKAPLLAKFRLSEPFEQPILKAEPTVLVQKLRPQDHFLIFASDGLWEHVSNQEAVDIVHNYPRNGVAKKLIKTALCAAAKKREMRYSDLKKIDRGVRRHFHDDITVIVLYLDSHLISRCYSRCPTVSIKGGGDFGIL. 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g08474 383 CDD PP2Cc 50 357 IPR001932 -
Seca7g08474 383 SMART PP2C_4 43 355 IPR001932 -
Seca7g08474 383 PANTHER PROTEIN PHOSPHATASE 34 355 IPR015655 GO:0004722|GO:0006470
Seca7g08474 383 Gene3D - 39 366 IPR036457 -
Seca7g08474 383 ProSiteProfiles PPM-type phosphatase domain profile. 49 357 IPR001932 -
Seca7g08474 383 FunFam Phosphatase 2C family protein 38 367 - -
Seca7g08474 383 SUPERFAMILY PP2C-like 76 358 IPR036457 -
Seca7g08474 383 ProSitePatterns PPM-type phosphatase domain signature. 83 91 IPR000222 GO:0043169
Seca7g08474 383 Pfam Protein phosphatase 2C 71 326 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g08474 Seca-Chr7 189461617 189465418 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g08474 3 381 PP2C-type Phosphatase Gene Family AT3G12620 75.789 0.0 599
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g08474 K01102 - gmx:100807559 648.277