Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g08431 ATGGCTGTCTCTGTGTCCTTGTTGAAACTAAAGTTTTGGTTGATTTTTGTTACGTGTTGTGTTATTGGTTTAAGTTCAGGTCAATTATCCACTACATTCTATGATAAAACGTGTCCAAAAGCAGTTACTACCATTAGGAAATCAGTGGAAGATGCTGTCTCCAAAGAGCGTCGCATGGGAGCATCCTTGCTTCGACTTCATTTCCATGACTGCTTTGTTCAAGGATGTGATGCATCAGTGTTGTTAGATGACACAGATACTTTCACTGGTGAGAAGACTTCTTTTCCCAATGCTAATTCCCTTAGGGGTTTTGATGTGATAGACAACATCAAATCTAAAATGGAGAACATGTGCCCTGGAGTTGTCTCTTGTGCTGACATCTTAGCCCTTGCTGCCAGAGACTCTGTTGCTGCTCTTGGTGGACAAAGGTGGGAAGTGCAATTAGGCAGAAGAGATTCAACCACAGCAAGTTTAGCTGATTCTAATACTGACTTACCTGCTCCTTTTTTGGATCTTAATGGCCTTATCTCTGCTTTTGAGAAGAAAAATTTCACAGCCAAAGAAATGGTTACTTTATCAGGAAATGATTGTTCATCAGGAGCTCACACAGTAGGCCTAGTGAGGTGCAGTTTATTCAGAGCAAGGATATATAATGAGACGAACATAGATCCTTCATTTGCAGCATCAATGCAACAAAATTGTCCCTTTGAAGGTGGTGATAACAATTTTTCTCCTTTTGATTCGACCACCCCATTTGTTTTTGACAATGCTTACTACCAGAACTTGGTGAGAAAGAGGGGTCTGATACACTCAGACCAACAACTGTTTGTGAATGGATCAGGACCCACAGACTCACAAGTGAGTACATATAGCAGAAACATGGGACGTTTCAAAAAAGACTTTGCAGATGCAATGTTCAAGATGAGCTTGCTTACACCACTCACTGGCTCTGATGGTCAGATCAGGACAAACTGCAGGGTCGTCAATTAA 990 0.4131 MAVSVSLLKLKFWLIFVTCCVIGLSSGQLSTTFYDKTCPKAVTTIRKSVEDAVSKERRMGASLLRLHFHDCFVQGCDASVLLDDTDTFTGEKTSFPNANSLRGFDVIDNIKSKMENMCPGVVSCADILALAARDSVAALGGQRWEVQLGRRDSTTASLADSNTDLPAPFLDLNGLISAFEKKNFTAKEMVTLSGNDCSSGAHTVGLVRCSLFRARIYNETNIDPSFAASMQQNCPFEGGDNNFSPFDSTTPFVFDNAYYQNLVRKRGLIHSDQQLFVNGSGPTDSQVSTYSRNMGRFKKDFADAMFKMSLLTPLTGSDGQIRTNCRVVN. 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g08431 329 FunFam Peroxidase 32 170 - -
Seca7g08431 329 Pfam Peroxidase 46 292 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca7g08431 329 Gene3D Peroxidase, domain 2 166 308 - -
Seca7g08431 329 FunFam Peroxidase 166 308 - -
Seca7g08431 329 CDD secretory_peroxidase 28 328 IPR033905 GO:0004601|GO:0042744
Seca7g08431 329 ProSiteProfiles Plant heme peroxidase family profile. 28 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca7g08431 329 ProSitePatterns Peroxidases active site signature. 60 71 IPR019794 GO:0004601
Seca7g08431 329 Gene3D - 32 326 - -
Seca7g08431 329 SUPERFAMILY Heme-dependent peroxidases 28 329 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca7g08431 329 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca7g08431 329 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca7g08431 329 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca7g08431 329 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca7g08431 329 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca7g08431 329 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca7g08431 329 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca7g08431 329 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca7g08431 329 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca7g08431 329 PRINTS Haem peroxidase superfamily signature 194 209 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca7g08431 329 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca7g08431 329 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca7g08431 329 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca7g08431 329 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca7g08431 329 PANTHER PEROXIDASE 72-RELATED 26 328 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g08431 Seca-Chr7 189055970 189057374 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g08431 28 329 Peroxidase AT5G05340 55.921 8.28e-119 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g08431 K00430 - gmx:100802244 499.59