Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g08420 ATGATCTCAGACACAGAGCCTGCAGAAAATGTCACCGCGGCCACCACCGCCGCCGGAAATGCCTCCGGCTCTTCTAAAGAAGATCATCCCGCACCGCCGGCAGCACCAAACATTTTGATGACCTCCAGGGATCACGATTCTCTCTTCAGCGGTGGCGGCATCAGCTTTCTATCTGGAAGTCGAAATGGAAGGTTCAGCTATGGATATTCAAGTTTCAAGGGTAAAAGGTCTTCAATGGAGGATTTCTTTGAGACCAGAATATCAGAGGTCGATGGTCAGATGGTTGCCTTTTTCGGTGTTTTTGATGGCCATGGAGGTTCACGGACTGCAGAGTACCTGAAAAATAATTTGTTTAAGAATTTGAGTAGCCATCCTGACTTTATCAAAGACACCAAGACTGCAATTGTTGAAGCATTTAAACAGACAGATGTTGATTACCTCAATGAGGAAAAGGGGCATCAAAGGGATGCTGGGTCCACTGCATCAACAGCTATGTTGTTGGGTGACCGAATTCTTGTTGCAAATGTTGGTGATTCCCGAGTAGTTGCATGTAGAGCTGGTTTAGCTGTTCCTTTGTCTATTGATCACAAACCTGATAGATCTGATGAGCGTCAAAGGATTGAACAGGCTGGAGGATTCATAATTTGGGCAGGAACATGGAGGGTTGGTGGTGTTCTTGCTGTTTCCCGTGCATTTGGAGACAAACTTCTTAAGCCATATGTTGTTGCTGACCCAGAAATTCAGGAGGAAGAAATTGATGGTGTAGATTTTATAATAATCGCTAGTGATGGCCTTTGGAATGTCATATCAAACAAGGAGGCCGTGTCTTTAGTACAAAATATCACAGATGCAGAAGTGGCATCAAGAGAACTTATTAAAGAAGCTTATGCACGAGGAAGCTCAGACAACATCACTTGTGTTGTTGTTCGATTTGATCTATCCTGA 945 0.4423 MISDTEPAENVTAATTAAGNASGSSKEDHPAPPAAPNILMTSRDHDSLFSGGGISFLSGSRNGRFSYGYSSFKGKRSSMEDFFETRISEVDGQMVAFFGVFDGHGGSRTAEYLKNNLFKNLSSHPDFIKDTKTAIVEAFKQTDVDYLNEEKGHQRDAGSTASTAMLLGDRILVANVGDSRVVACRAGLAVPLSIDHKPDRSDERQRIEQAGGFIIWAGTWRVGGVLAVSRAFGDKLLKPYVVADPEIQEEEIDGVDFIIIASDGLWNVISNKEAVSLVQNITDAEVASRELIKEAYARGSSDNITCVVVRFDLS. 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g08420 314 CDD PP2Cc 65 311 IPR001932 -
Seca7g08420 314 ProSiteProfiles PPM-type phosphatase domain profile. 66 311 IPR001932 -
Seca7g08420 314 MobiDBLite consensus disorder prediction 1 37 - -
Seca7g08420 314 PANTHER PROTEIN PHOSPHATASE 40 311 IPR015655 GO:0004722|GO:0006470
Seca7g08420 314 SMART PP2C_4 55 309 IPR001932 -
Seca7g08420 314 Pfam Protein phosphatase 2C 67 304 IPR001932 -
Seca7g08420 314 SUPERFAMILY PP2C-like 59 312 IPR036457 -
Seca7g08420 314 ProSitePatterns PPM-type phosphatase domain signature. 97 105 IPR000222 GO:0043169
Seca7g08420 314 Gene3D - 59 313 IPR036457 -
Seca7g08420 314 MobiDBLite consensus disorder prediction 1 23 - -
Seca7g08420 314 FunFam probable protein phosphatase 2C 59 58 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g08420 Seca-Chr7 188969966 188977385 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g08420 38 314 PP2C-type Phosphatase Gene Family AT1G43900 74.368 1.78e-157 443
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g08420 K17506 - gmx:100776867 541.191