Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g08416 ATGGCGAGGATCAAGGTTCACGAGCTGAGGCAGAAGACCAAGGTTGAGCTGTTGAATCAGCTCAAGGACCTCAAGGCTGAGCTTGCCTTGCTCCGTGTTGCTAAGGTCACCGGAGGTGCACCCAACAAGCTCTCCAAGATGTTTCTCTTTACATTTTTGCCTGTGAGGTGTTTGTGTTTATGTCTTCAAATCATTTTGGGTTGCTGCAGAAAGGTGGTGAGGTTGTCCATTGCACAGGTTTTGACTGTGATTTCTCAGAAGCAGAAGTCTGCTTTGAGGGAAGCATACAAGAACAAGAAGTACTTGCCACTTGATCTGCGCCCAAAGAAAACCAGGGCTATTCGTAGAAGGCTTACCAAGCACCAGGCATCATTGAAGACTGAGCGGGAGAAGAAGAAAGAGACATATTTCCCAATGAGGAAATATGCTATCAAGGTGTAG 441 0.4671 MARIKVHELRQKTKVELLNQLKDLKAELALLRVAKVTGGAPNKLSKMFLFTFLPVRCLCLCLQIILGCCRKVVRLSIAQVLTVISQKQKSALREAYKNKKYLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKETYFPMRKYAIKV. 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g08416 146 Gene3D - 101 146 - -
Seca7g08416 146 Pfam Ribosomal L29 protein 8 46 IPR001854 GO:0003735|GO:0005840|GO:0006412
Seca7g08416 146 NCBIfam 50S ribosomal protein L29 8 46 IPR001854 GO:0003735|GO:0005840|GO:0006412
Seca7g08416 146 Gene3D - 1 100 IPR036049 GO:0003735|GO:0005840|GO:0006412
Seca7g08416 146 SUPERFAMILY Ribosomal protein L29 (L29p) 4 47 IPR036049 GO:0003735|GO:0005840|GO:0006412
Seca7g08416 146 Coils Coil 14 34 - -
Seca7g08416 146 PANTHER 60S RIBOSOMAL PROTEIN L35 1 146 IPR045059 GO:0000463|GO:0022625
Seca7g08416 146 FunFam 60S ribosomal protein L35 101 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g08416 Seca-Chr7 188923137 188925570 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g08416 1 146 Cytoplasmic Ribosomal Protein Gene Family AT5G02610 78.767 7.79e-74 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g08416 K02918 - aew:130764067 213.386