Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g08410 ATGGTATTCTATCGTACCCGCAATATGGCTTTTCTTCTCTGTGGGATGATAAATCAAGTTTTTTTTTTTGTTATTGGTAGGTTTTTGGATGTGAACCCTGAAGGGAAGGTGCCGGTGGTTCAGTTTGATGGCAAATGGGTGTCTGATTCTGATGTTATTGTGGGGATACTCGAGCAAAAATACCCAGAACCCTCTCTCGTCACTCCTTCTGAATTTGCCTCCGTGGGATCAAAGATATTTGGGTCTTTCGTGAGTTTTCTGAAGAGCAAGGATGCAAATGATGGAACAGAGCAAGCGTTGGTTGCTGAATTGAACGCTTTGGAGGAACATCTTAAGGCCCATGGTCCATATGTTGCTGGGGCGAAGGTTACTGCCGTTGATTTGAGTTTGGCACCAAAACTGTACCATCTAGTAGTTGCACTTGGCCACTTCAAGAATTGGACTATTCCTGAAAGTTTGACACATGTCAACAACTACACCAAGTTGCTCTTCTCCCGGGAATCATTTGAGAAAACCAAGGCTGCAAAGGAATATGTTATTGCTGGATGGGCACCAAAGGTCAATGCATGA 570 0.4386 MVFYRTRNMAFLLCGMINQVFFFVIGRFLDVNPEGKVPVVQFDGKWVSDSDVIVGILEQKYPEPSLVTPSEFASVGSKIFGSFVSFLKSKDANDGTEQALVAELNALEEHLKAHGPYVAGAKVTAVDLSLAPKLYHLVVALGHFKNWTIPESLTHVNNYTKLLFSRESFEKTKAAKEYVIAGWAPKVNA. 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g08410 189 CDD GST_C_DHAR 66 186 - -
Seca7g08410 189 FunFam Glutathione S-transferase DHAR3, chloroplastic 67 189 - -
Seca7g08410 189 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 28 186 IPR044627 GO:0033355|GO:0045174|GO:0098869
Seca7g08410 189 SUPERFAMILY GST C-terminal domain-like 60 187 IPR036282 -
Seca7g08410 189 SUPERFAMILY Thioredoxin-like 27 65 IPR036249 -
Seca7g08410 189 Gene3D - 67 189 - -
Seca7g08410 189 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 65 IPR004045 -
Seca7g08410 189 Gene3D Glutaredoxin 21 66 - -
Seca7g08410 189 Pfam Glutathione S-transferase, N-terminal domain 28 64 IPR004045 -
Seca7g08410 189 Pfam Glutathione S-transferase, C-terminal domain 93 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g08410 Seca-Chr7 188865427 188869162 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g08410 28 189 Glutathione S-transferase Gene Family AT1G75270 78.528 2.12e-91 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g08410 K21888 - gmx:100306061 293.508