Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g08368 ATGGAGGGAAAGCCACCACCACCACCACCTCGCGGCGGGCGACGGAGCGCCGACCGCCTCAACCTCGGCTCGAGCTCCAGTAACCCTCAGCCTCAGCCTCAGCCTCAGCGACAAGAACGTGCACAAATTAGAGTGGCTCCTGGTATGAACTACGAGAAAGGCTATTTTGATTTTTACAAAAGCCTTGGAGTCCATGAAGAGATGCTCAAGGATCAAGTGCGGAATGATGCTTATCAGAATGCGATATTGTATCACAGGGAGCTCATTGAAGGCAAAGTTGTACTTGACGTTGGATGCGGCACTGGTTTCCTTGCTATCCTTTGTGCTCAGGCTGGTGCAAAGCGGGTGTATGCAGTTGAAGCAAGTGGCATTTCTGAGCAGGCGAAAAATGTTGTTGATGAAAATAATCTTTCAGAAACAATCACGGTAATGCATGGACTAGTTGAGGAGGTTGACATCGGAGAAAAGGTTGATGTAATAATTTCAGAATGGATGGGCTATATGCTTCTATATGAGGGCATGCTTGGAAGTATTATTGTAGCAAGGGATCGTTGGCTCAAACCTGGAGGTCTAATTCTTCCTTCAAATGCAACGTTGTACATTGCTCCTTTCACACACCCTAAAAGATACCGTGACAGCATTGACTTCTGGCACAATGTTCATGGCATTGATATGTCTGTCTTAATACCAACAGCAAAACAAAGTGCCTTTGAAGAACCTCAAGTCGAGACAATTCCGAAAGAAAACATTTTGAATTGGCCGCATGTGGTGAGATATATCAACTGTTATACTGTTACCCTTCCTGAGTTAGAATGTATAACATCAACGTTTACTTTCAACTCATCAATCCGAGCACCACTACATGGTTTTGCATTTTGGTTTGATGTTGGATTTACTGGGCATGCGACATCACCATTGCCAGTCACTTATGGTAGTCCGAGTTCAAAACGGAAAAACCTTGCTGATGCACTGATCCTGTCCACTGCGCCTGAAGAGCTGCCAACACATTGGCAACAGACTTTAATATTCTTTCAGGATCCGATCGAGGTGGAAACAGATCAACTTATTGAAGGATCAGTGACATTGTCACAAAACGAAGTGCATCCTCGTTATATGGATATTCACCTTTATTATGAATACTGTGGTCATTCCCTTGCGAAATTTACTGTTTTCAAATGA 1179 0.4411 MEGKPPPPPPRGGRRSADRLNLGSSSSNPQPQPQPQRQERAQIRVAPGMNYEKGYFDFYKSLGVHEEMLKDQVRNDAYQNAILYHRELIEGKVVLDVGCGTGFLAILCAQAGAKRVYAVEASGISEQAKNVVDENNLSETITVMHGLVEEVDIGEKVDVIISEWMGYMLLYEGMLGSIIVARDRWLKPGGLILPSNATLYIAPFTHPKRYRDSIDFWHNVHGIDMSVLIPTAKQSAFEEPQVETIPKENILNWPHVVRYINCYTVTLPELECITSTFTFNSSIRAPLHGFAFWFDVGFTGHATSPLPVTYGSPSSKRKNLADALILSTAPEELPTHWQQTLIFFQDPIEVETDQLIEGSVTLSQNEVHPRYMDIHLYYEYCGHSLAKFTVFK. 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g08368 392 MobiDBLite consensus disorder prediction 19 39 - -
Seca7g08368 392 Gene3D Vaccinia Virus protein VP39 48 194 IPR029063 -
Seca7g08368 392 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 47 379 IPR025799 GO:0016274|GO:0018216
Seca7g08368 392 MobiDBLite consensus disorder prediction 1 39 - -
Seca7g08368 392 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 58 382 IPR029063 -
Seca7g08368 392 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 52 375 IPR025799 GO:0016274|GO:0018216
Seca7g08368 392 Pfam Ribosomal protein L11 methyltransferase (PrmA) 88 163 - -
Seca7g08368 392 CDD AdoMet_MTases 94 193 - -
Seca7g08368 392 Gene3D - 196 390 - -
Seca7g08368 392 FunFam Protein arginine N-methyltransferase 6 49 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g08368 Seca-Chr7 188461670 188467802 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g08368 53 359 C2H2 Transcription Factor Family AT3G12270 39.009 6.40e-66 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g08368 K11437 - mnt:21405865 466.848