Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g08367 ATGGCAGATGTAAAACTACTAGGATTTTGGTCTAGCCCTTTTGTTCATAGAGTGATATGGGCTCTAAAGTTGAAGGGCATCAGCTATGAGTACATAGAACAAGACAGGTATCACAAAAGTGAGCTACTTCTGCAATCCAATCCAGTTCACAAGAAAGTCCCTGTATTTATTCATGGAGGCAAAGCCATCCCAGAGTCTCTTGTGATTCTTCAATACATTGAAGAAACATGGCCAGAGAATTACCCATTGCTGCCAAAGGATAACCATGAGAGAGCCTTAGCTCGATTCTGGATTAAATTTGGAGAGGATTCGATTGCTTCTATAACTGATCTGTTTCTCCGACCCTCTAAAGATGAAGAAGAAAGAGCAAGTGCGGTGAAAAAAGCACAAGAATCTATTGCAATAATGGAAGAGCAAGGTCTAGGGGACAAGAAGTTCTTTGGAGGCAACAATATTGGAATGGTGGACATAGCATATGGTTGCCTTAGTCATTGGTTAGAAGGCTTGGAGGAAATTGTGGGGATGAAACTGATTGAGCCAAACAAATTTCCTAAGTTACATGCTTGGATGCAAAATTTTAAACAAGTTTCTGTGATTAAAGAAAACCTTCCTGATTATGGGAAATTGTTGCTCCATCTTGAAAGGCGCAGGCAGGAATATATATAA 666 0.3994 MADVKLLGFWSSPFVHRVIWALKLKGISYEYIEQDRYHKSELLLQSNPVHKKVPVFIHGGKAIPESLVILQYIEETWPENYPLLPKDNHERALARFWIKFGEDSIASITDLFLRPSKDEEERASAVKKAQESIAIMEEQGLGDKKFFGGNNIGMVDIAYGCLSHWLEGLEEIVGMKLIEPNKFPKLHAWMQNFKQVSVIKENLPDYGKLLLHLERRRQEYI. 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g08367 221 CDD GST_C_Tau 89 216 IPR045074 GO:0004364|GO:0006749
Seca7g08367 221 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Seca7g08367 221 FunFam Tau class glutathione S-transferase 84 221 - -
Seca7g08367 221 CDD GST_N_Tau 4 77 - -
Seca7g08367 221 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 87 220 IPR010987 -
Seca7g08367 221 Gene3D - 84 220 - -
Seca7g08367 221 Pfam Glutathione S-transferase, C-terminal domain 112 193 IPR004046 -
Seca7g08367 221 Pfam Glutathione S-transferase, N-terminal domain 3 74 IPR004045 -
Seca7g08367 221 Gene3D Glutaredoxin 1 83 - -
Seca7g08367 221 FunFam Putative glutathione S-transferase 1 83 - -
Seca7g08367 221 SUPERFAMILY GST C-terminal domain-like 75 218 IPR036282 -
Seca7g08367 221 SFLD Glutathione Transferase (cytosolic) 1 219 IPR040079 -
Seca7g08367 221 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 6 205 IPR045073 -
Seca7g08367 221 SFLD Main.3: Omega- and Tau-like 1 219 IPR045073 -
Seca7g08367 221 SUPERFAMILY Thioredoxin-like 3 103 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g08367 Seca-Chr7 188445875 188446664 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g08367 3 219 Glutathione S-transferase Gene Family AT2G29420 45.161 2.43e-60 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g08367 K00799 - gmx:547586 402.519