Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca7g08348 | ATGTCGGCCTCCGATGGAACCACCAACGGGTCAATGATTGACCCACAGCGCAACCAGCAATTAGCCGTCAAGAAACCCCCCTCAAAGGACCGTCACAGCAAGGTCGACGGCCGTGGACGCCGTATACGGATGCCAATCATTTGCGCCGCACGTGTCTTCCAGCTCACGCGTGAGTTAGGCCATAAGTCCGACGGTCAAACCATCGAGTGGCTCCTCCGTCAAGCCGAACCCTCCATCATCGCCGCCACTGGCACCGGCACCACTCCCGCCAGCTTCTCCTCCGTCTCCGTCTCTGTTCGCGCTTCCAACTCCCTTCCTTCCCCTTCCTCCACTTCCTCTCTCGACCACAAGCCCTTGCTCGCTTCTCCCACCCCTTTCATTCTCGGCAAGCGTATTCGCACCGATGATGATTCCTCTGCCGCCAAGGACGACGCCGTTTCCGTGGGACACTCCTTGGTGGGCCCTGCTACCCCCGCTGGATTGTGGGCCCTTCCCGCTAGGCCCGATTTCGGACAAATTTGGAGCTTCGCGGCGGCTGCTGCTGCTGCGGCTCCTCCGCCGGAAATGGTGGTGCAGCCTGCGGCCGTGTCGGTGTCTCAGCAGCAGCAGCAGCAGGCTTCGTTGTTCGTTCATCATCATCATCAACAGCAACAAGCCATGGGAGAAGCTTCGGCGGCGAGGGTGGGGAATTACCTTCCGGGGCATCTGAATTTGCTGGCATCGTTGTCCGGTGGACCTGGAAATTCTGGTCGGAGAGACGATGAGCCTCGTTGA | 774 | 0.6008 | MSASDGTTNGSMIDPQRNQQLAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSSVSVSVRASNSLPSPSSTSSLDHKPLLASPTPFILGKRIRTDDDSSAAKDDAVSVGHSLVGPATPAGLWALPARPDFGQIWSFAAAAAAAAPPPEMVVQPAAVSVSQQQQQQASLFVHHHHQQQQAMGEASAARVGNYLPGHLNLLASLSGGPGNSGRRDDEPR. | 258 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca7g08348 | 257 | ProSiteProfiles | TCP domain profile. | 28 | 82 | IPR017887 | - | |
Seca7g08348 | 257 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
Seca7g08348 | 257 | MobiDBLite | consensus disorder prediction | 24 | 40 | - | - | |
Seca7g08348 | 257 | Pfam | TCP family transcription factor | 28 | 142 | IPR017887 | - | |
Seca7g08348 | 257 | PANTHER | TRANSCRIPTION FACTOR TCP4-RELATED | 20 | 231 | IPR005333 | GO:0003700 | |
Seca7g08348 | 257 | MobiDBLite | consensus disorder prediction | 1 | 40 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca7g08348 | Seca-Chr7 | 188290460 | 188291233 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca7g08348 | 7 | 257 | TCP Transcription Factor Family | AT5G23280 | 64.822 | 2.71e-102 | 296 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | TCP | Seca7g08348 | TCP | 3.2e-32 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca7g08348 | K16221 | - | gmx:100799005 | 350.132 |