Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g08329 ATGGAGGCCGGTTCTACTACTATTTCTCCTTCTGGTTATAAGGGAAAGAAGCGCGGCAGAAAGAGTAAAGCCGAAAAAGAAGCAGGTTCTACTACTTCTTCTTCTTCTGGTTACAAGGGAAAAAAGCGCGGCAGAAAGAGTAAAGCTGAAAAAGAAGCAGGTTCTACTACTACTTCTTCTTCTTGTTATAAGGGAAAGAAGCGCGGCAGAAGGACTAAAGCTGAAAAAGAAGCCTTTTTGAAGAACTTGTTAGAGGAAGCAAATGGGTTGGTGGACAAGGAAGATGATGGTGGTGATGGGGAAGGGGTTTCTTCTTCTGTTCAAGCTGCTGAGAGAAAGGAAGTGGAGAAGGAGGCCTTGGATGGAGCAAAAGGGGTTGATGATCCTGCATTGGTTGAAAATGTAAAGGAGGGCAATTTGGTGGACAGGGAAGCTGCACAGGACAATAGCCACGGGGAAAATGGTAGGGTTATCAAGAACAAGAAGGGGAGTGGCAGAAAAAGAAAGCTCACCGAGAAAGGTGAGTCTATTTCTAAACAGCTGGCTAGTAGAAAAAAGAGAGGTCCAAGGCGTAGAGATGGAGATGGTGAAGGAGAGGCAAGGAGTGATGTTTTGGGGGCTCAGACTCAGGCTCAGGCTCCGGCTCCGCACAATGGTGGTGAATTTGAAATTCCTATAGATTCTTCAGGAATCGGCACTCAGAAACAGAAGTATCAGTTAAGGGACCGTCCTCCTATTAAAGACTTAGACTATAAAGAGATGCCAAAAGTCAATAAGAGAAATGCCAAGTGGATTGGAGAGGAGTCCTTAATGTGCCATCAATGTCAGAGAAATGATAAGGGCCCGGTTGTGAGATGCACAAGTTGTAAACGGAAAAGATTTTGCTTACACTGTATAAAGAATTGGTATCCTCGACTGAAAAAGGATGATATTGCTAAGGCATGCCCTGTTTGCTGTGGTAATTGCAATTGCAAAGCCTGCTTGCGATCTGATGATCTTATTAATAAAATAAAAGCAGATCAGCTTTCAAAAAAAAAAAAGAAAGTAAAAGCAGATGAGAAAATTAATGAAGATGGGAATGAAGATGGGGAGGTTGAGCACTATAAGTATCTGCTGAAAGGCCTTCTTCCTTGTTTAAGACAGTTGAATGAAGAACAAATGATTGAGAAAGAGATAGAAGCTAAGCGACAAGGGCTCTTACTCTCAGAGCTAAAAATAGAAAAGACAAATTCCTCTATTAAAGAGCGTGTGTACTGTGACAACTGCCAAACATCGATATTTGATTTCCACAGAAGTTGTACAGAATGCTGTTTTGACCTTTGTCTCATCTGTTGCCGTGAGCTTCGTAGTGGCAAACTTCTAGGTGGCACAGATCCAATTGATTTGGGGTTTGACTTCCGAGGTCTTGGTTATATGCATGGTGAAGAAAAAAATGAAGAGGTAAAAGTAATTGCATCACATGCAAATGCCGGGCTGGAGATTCGTGATTGGTCAAAATCTGGGTGGCATGCTGATAGTGATGGTAACATTCCTTGTCCAAAAGCCAATAATGAATGTGACCATGGTTTTCTTGAACTGAGAAGCATACTTTCTCCAAATTTCGTCTCTGAGATAGTATGTGATGCAGAAGAACTAGCAGAAGCATATAAGCTTCAAGATGCAGTTGAGATTCTTGATAACTGGTGTTCTTGTTTGAAGCTTGCTAGAAACACAGATGATAAGTATATTAATATGAGGAAGGCAGCTTCCCGTGAAGATTCCATTGACAACTATTTATACTGTCCTAGAGCTGTAGATCTGCAGAAGGAGGATTTAAGGCATTTTCAATGGCATTGGAGCAAAGGGGAGCCTGTAATTGTCAGCAATGTGCTTGAATGTACATCTGGTTTAAGCTGGGAACCACTGGTCATGTGGCGTGCATGCCGTCAGATAGCTAATACAAAGCATGGCATACATTTGGATGTGAAGGCAATTGACTGCTTAGATTGGTGTGAGGGAGAGATTAATATCCATCAATTCTTTACTGGGTATACAGAGGGTCGTAAGGATTGGCTTAATTGGCCTCAGATATTGAAATTAAAAGATTGGCCTCCTTCTAATTTGTTTGAGGAACGTTTACCTCGTCATTGTGCTGAGTTCATATCGTCCTTGCCCTATAAAGAATATACGGATCCTTACAGGGCTGCACTTAACCTTGCTGTGAAGTTGCCTGAGGGTTGTATAAAGGCCGACATGGGACCAAAAACATATATTGCTTATGGCTTTGCTCAGGAGCTTGGGCGTGGTGATTCTGTGACTAAGCTCCATTGTGACATGTCTGATGCAGTAAATGTGTTGACTCATATTGCTGAAGTGAAATTGAAACCTGAGGTCGTGAAAGCCATTGAAAAATTGACTCCAAAGCACCTTGAGCAAGACAAAAGGGAGCTACTTGGAGATAATCTGGATGGAGACACTAATGTTGACATGCTTCACAATTCATCTTCTACCATAAATGCTTCAGACAACCAAAATGGTGTTCGAGTCATGGAAAATGATAGTGGAATATGTGACGGCAAGGTGGTTGATCAGCTTCATCAACACTCTGGTACTAATGATTATGGTCATTCATGTGGATCAGAGCTCAAAGAGATTGAGAAAGCGGCAATGAATCAAGAAAATTGTATGTCGGTTGGGGATGATGCTTTAGATGGTGCTCTTTGGGATATTTTTCGAAGAGAGGATGTGCCTAAATTGGAGGAATATCTGAAGAAGCATTTCAGAGAGTTCAGGCATGTCTATTGCAGTCCGTTAAAGCAGGTTATTCATCCCATCCATGATCAGACCTTTTATCTTAGTATGGAGCATAAGAAGAAGCTGAAGGAGGAGCATGGAATTGAGCCCTGGACTTTTATTCAGAAGCTAGGAGATGCTGTTTTTATTCCAGCTGGTTGTCCTCACCAAGTCAGAAATCTGAAGTCATGCATCAAGGTTGCACTTGATTTTGTCTCTCCTGAAAATGTTGGCGAGTGCTTCCGTTTGACCGAGGAATTCCGTACGCTTCCAATAAATCACAAGTCCGTTGAGGACAAATTGGAGGTGAAGAAAATGACTATTTATGCTATGAAGGATGTGGTTGAAAAATTGAGGGTAGTAAGGTCTGGGGATACCAAGGTTCCAGTGTAA 3165 0.4196 MEAGSTTISPSGYKGKKRGRKSKAEKEAGSTTSSSSGYKGKKRGRKSKAEKEAGSTTTSSSCYKGKKRGRRTKAEKEAFLKNLLEEANGLVDKEDDGGDGEGVSSSVQAAERKEVEKEALDGAKGVDDPALVENVKEGNLVDREAAQDNSHGENGRVIKNKKGSGRKRKLTEKGESISKQLASRKKRGPRRRDGDGEGEARSDVLGAQTQAQAPAPHNGGEFEIPIDSSGIGTQKQKYQLRDRPPIKDLDYKEMPKVNKRNAKWIGEESLMCHQCQRNDKGPVVRCTSCKRKRFCLHCIKNWYPRLKKDDIAKACPVCCGNCNCKACLRSDDLINKIKADQLSKKKKKVKADEKINEDGNEDGEVEHYKYLLKGLLPCLRQLNEEQMIEKEIEAKRQGLLLSELKIEKTNSSIKERVYCDNCQTSIFDFHRSCTECCFDLCLICCRELRSGKLLGGTDPIDLGFDFRGLGYMHGEEKNEEVKVIASHANAGLEIRDWSKSGWHADSDGNIPCPKANNECDHGFLELRSILSPNFVSEIVCDAEELAEAYKLQDAVEILDNWCSCLKLARNTDDKYINMRKAASREDSIDNYLYCPRAVDLQKEDLRHFQWHWSKGEPVIVSNVLECTSGLSWEPLVMWRACRQIANTKHGIHLDVKAIDCLDWCEGEINIHQFFTGYTEGRKDWLNWPQILKLKDWPPSNLFEERLPRHCAEFISSLPYKEYTDPYRAALNLAVKLPEGCIKADMGPKTYIAYGFAQELGRGDSVTKLHCDMSDAVNVLTHIAEVKLKPEVVKAIEKLTPKHLEQDKRELLGDNLDGDTNVDMLHNSSSTINASDNQNGVRVMENDSGICDGKVVDQLHQHSGTNDYGHSCGSELKEIEKAAMNQENCMSVGDDALDGALWDIFRREDVPKLEEYLKKHFREFRHVYCSPLKQVIHPIHDQTFYLSMEHKKKLKEEHGIEPWTFIQKLGDAVFIPAGCPHQVRNLKSCIKVALDFVSPENVGECFRLTEEFRTLPINHKSVEDKLEVKKMTIYAMKDVVEKLRVVRSGDTKVPV. 1055
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g08329 1054 MobiDBLite consensus disorder prediction 1 74 - -
Seca7g08329 1054 SUPERFAMILY Clavaminate synthase-like 604 1030 - -
Seca7g08329 1054 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 18 1043 IPR045109 GO:0032454|GO:0033169
Seca7g08329 1054 ProSiteProfiles Zinc finger RING-type profile. 272 318 IPR001841 -
Seca7g08329 1054 MobiDBLite consensus disorder prediction 88 239 - -
Seca7g08329 1054 Pfam JmjC domain, hydroxylase 888 995 IPR003347 -
Seca7g08329 1054 MobiDBLite consensus disorder prediction 137 160 - -
Seca7g08329 1054 MobiDBLite consensus disorder prediction 168 200 - -
Seca7g08329 1054 ProSiteProfiles JmjC domain profile. 725 1012 IPR003347 -
Seca7g08329 1054 Gene3D Cupin 592 1021 - -
Seca7g08329 1054 SMART cupin_9 706 1012 IPR003347 -
Seca7g08329 1054 MobiDBLite consensus disorder prediction 110 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g08329 Seca-Chr7 188138630 188159905 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Seca7g08329 JmjC 5.9e-16 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g08329 K15601 - gmx:100805723 1231.47