Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g08325 ATGCAATCAATTCGGAAATCCTTCAAATCTTATGGTTCCTACAATAAACATTCTAGAAGGTTTTCCGCCACCGGAAACCCAGATTCCGAGCACGAACACCTCCCTATCCTTCACGATCAAGAAACTCGTCATAGCAGCAGCCACTCTTATCCAATGGCTGGAGATGTCGTTGTTAAGATCGACGAAGGTGGTGAACCTACGCAGGGTAACAAAATTTGGAGAGAGTCTAGCTATGATTTCTGGCAAGATGGTGGTGACAATGGCGAAGAGAGCTTTGATTTTCGACAGAAGAGTCCTGAAGACCCGCCGTCGCAGCTGATCGGAAAGTTTCTGCATAAACAGAGAGCCTCCGGCGAGATGGCACTCGACATGGATTTGGAAATGGAAGAGCTCCAGCATGACGGTGATGGCGATGGGAAGTTGACGCCGGTGGAGGAATCTCCGATGACACACCGGATATCCAGGGAGCTCAAGGTCTCGTTTGAGGAACCTCCTCCCAATGTGGTTGAGATGGTCAATGATCATGTCAGAAGAAGGCATAGCAAGGATTCGCCCTCGCTCGGAGAGTTTCAGAGGCCTCCGCATCCGCCGCATCATGACCGTCGCCGGTCTCCGTCTCCGGCTGGCAATGGCGGTGACGGTGAGGTTGTCAGGTGCACCTCTAACGCTTCTTTTGAAAGGAACCTTTCTATGCAGAGGAAGTCCATGTTGTTGAAAACCAAAACCAGGTCCAGGTTGATGGACCCGCCCGAGGAACCCGAGAGGAAATCGGGTCGGGTTATGAAATCGGGGCAGCTTTTGTCCGGGTTTCTGGGAAAGAGGAGTGAGGATGAGGAGGATGATCCGTTTTTGGAAGAGGATCTTCCGGATGAGTATAAGAAAACCCAGTTTAGCTTATGGGTTCTGCTTGAGTGGTTGAGCTTGATTTTGATCATTGGTGCACTGATAACCACGCTTAGTATTCCAGTTCTGAGGGACAAGAATCTCTGGCAGCTCAGGTTGTGGAAATGGGAGGTAATGATTCTGGTTTTAATCTGTGGCAGGTTGGTTTCTGATTGGGTTATAAGGATTGTTGTTTTCTGCATTGAAAGGAATTTCCTTTTGAGGAAGAGGGTGCTGTATTTTGTGTATGGTGTGAGGAAGGCCGTTCAGAATTGTGTGTGGTTGGGCCTTGTTTTGATTGCATGGCATTTCTTGTTTGATAAGAAAGTTCAGAGGGAGACTAAGAGTGATTTCCTTCAATATGTCACCAAGGTCTTGGTCTGTTTCTTGGTGGGTACTTTGGTGTGGTTGGGGAAAACTCTTGTGGTTAAGGTTCTTGCTTCTTCTTTCCATGTAAGCACCTACTTTGATAGGATTCAAGAGTCACTGTTTAATCAATTTGTGATTGAAACACTTTCGGGGCCACCCTTGGTTGAGCTTCAAAGGGCTGAAGAAGAAGAGGAAAGGCTTGCTGATGAGGTTAGGAAGCTGCAGAATGCTGGGGTTACCATACCCCCTGACCTTAGAGATTCTGCTTTCCCTACCATCAAGAGTGGAAAGTTGAAGAGTGGAATGCTCCAGAAAAGCCCCAGAATCAAAAGTGCCAAGTTTTCACGGCCACTCTCCAAGAAATCGGATGATGGGAATGGGATAACTATTGATCACCTGCATAAGCTGAATCCAAATAATGTCTCTGCCTGGAATATGAAAAGGTTGATGAATATGGTCCGGCATGGGGCTCTCTCTACACTGGATGAGCAGATACTTGAATCTTCTAATGATGATGAGAATGCCACGCAAATTAGAAGTGAAAATGAGGCTAAAGCAGCAGCAAAGAAAATATTTCAGAATGTTGCTAGGCGCGGGTGCAGGTATATATACCCAGAGGATTTGATGCGTTTCATGCGAGAAGATGAAGCTGTAAAAACCTTAAATCTCTTTGAAGGAGCGACTGAATCTGGGAGAGTAAGCAAATCAGCCTTGAAGAACTGGGTGGTAAATGCCTTCAGGGAGAGGAGAGCACTTGCTTTGACATTGAATGACACCAAAACAGCAGTGAACAAGCTTCATCGAATGCTCAATTTTTTAGTTGCCATTATTATCCTCATTATCTGGCTCTTGATATTGGAAATTGCCACCAGCAAATTCCTTCTTTTTGTGAGCTCACAGGTTGTTGTGGTTGCATTTATATTTGGAAACACCTGCAAGACCATATTTGAAGCAATCATTTTCTTATTTGTCATGCACCCATTTGATGTGGGAGATAGATGTGAAATTGACGGGGTCCAGGTAATGTTTATCTCTCAATAA 2292 0.4568 MQSIRKSFKSYGSYNKHSRRFSATGNPDSEHEHLPILHDQETRHSSSHSYPMAGDVVVKIDEGGEPTQGNKIWRESSYDFWQDGGDNGEESFDFRQKSPEDPPSQLIGKFLHKQRASGEMALDMDLEMEELQHDGDGDGKLTPVEESPMTHRISRELKVSFEEPPPNVVEMVNDHVRRRHSKDSPSLGEFQRPPHPPHHDRRRSPSPAGNGGDGEVVRCTSNASFERNLSMQRKSMLLKTKTRSRLMDPPEEPERKSGRVMKSGQLLSGFLGKRSEDEEDDPFLEEDLPDEYKKTQFSLWVLLEWLSLILIIGALITTLSIPVLRDKNLWQLRLWKWEVMILVLICGRLVSDWVIRIVVFCIERNFLLRKRVLYFVYGVRKAVQNCVWLGLVLIAWHFLFDKKVQRETKSDFLQYVTKVLVCFLVGTLVWLGKTLVVKVLASSFHVSTYFDRIQESLFNQFVIETLSGPPLVELQRAEEEEERLADEVRKLQNAGVTIPPDLRDSAFPTIKSGKLKSGMLQKSPRIKSAKFSRPLSKKSDDGNGITIDHLHKLNPNNVSAWNMKRLMNMVRHGALSTLDEQILESSNDDENATQIRSENEAKAAAKKIFQNVARRGCRYIYPEDLMRFMREDEAVKTLNLFEGATESGRVSKSALKNWVVNAFRERRALALTLNDTKTAVNKLHRMLNFLVAIIILIIWLLILEIATSKFLLFVSSQVVVVAFIFGNTCKTIFEAIIFLFVMHPFDVGDRCEIDGVQVMFISQ. 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g08325 763 MobiDBLite consensus disorder prediction 132 151 - -
Seca7g08325 763 MobiDBLite consensus disorder prediction 244 259 - -
Seca7g08325 763 MobiDBLite consensus disorder prediction 172 186 - -
Seca7g08325 763 MobiDBLite consensus disorder prediction 1 49 - -
Seca7g08325 763 MobiDBLite consensus disorder prediction 230 260 - -
Seca7g08325 763 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 37 759 IPR016688 -
Seca7g08325 763 MobiDBLite consensus disorder prediction 1 22 - -
Seca7g08325 763 MobiDBLite consensus disorder prediction 157 218 - -
Seca7g08325 763 Coils Coil 471 494 - -
Seca7g08325 763 PIRSF Memb_At2g17000 26 760 IPR016688 -
Seca7g08325 763 MobiDBLite consensus disorder prediction 78 103 - -
Seca7g08325 763 MobiDBLite consensus disorder prediction 23 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g08325 Seca-Chr7 188059111 188064086 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g08325 55 759 Mechanosensitive Ion Channel Family AT1G78610 56.800 0.0 721
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g08325 K22048 - gmx:102665658 1182.93