Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g08309 ATGTTATCAGAGTTGATGAACTTATTGAGGGCCTGCTTCCGGCCGGGTTCGGATCGATATGTACGCACAGGTTCAGATGCTGGAGGTAAACAGGATGGACTATTGTGGTACAAAGACTCAGGGCAGCACTTGAATGGTGAATTCTCAATGGCTGTAGTCCAAGCCAATAACTTGCTGGAGGATCAGAGTCAAATTGAATCAGGCAGTTTGTGCTCCAATGAGTCTGGCCCTCATGGAACCTTTGTTGGTGTCTATGATGGGCATGGAGGGCCTGAGACATCACGGTTTATCAATAAACACCTATTTCAGCATCTCAAGAGATTTACTTCAGAGCAACAATCAATGTCAGTGGATGTAATTCGCAAGGCATTCCAAGCAACAGAAGAGGGGTTTATGTCTGTGGTTTCCAGCCAGTGGTCAATAACACCCCAAATTGCAGCTGTTGGGTCATGCTGTCTTGTTGGTGTTATTTGCAATGGAACCCTTTTTATAGCAAATCTTGGTGATTCCCGGGCTGTTTTGGGAAGAGCAGTCAAGGCAACTGGTGAGGTTTTAGCCATGCAATTATCGGCAGAGCACAATGCATCGATAGAGTCTGTAAGACAGGAGCTGCAATCTTTGCACCCTGATGATTCAAATATTGTTGTTTTAAAGCATAATGTATGGCGTGTGAAGGGCCTTATTCAAATATCTAGATCTATTGGTGATGTATATTTGAAAAAGGCTGAGTTCAATAGAGAACCACTATATGCCAAGTTTCGACTTCGTGAGCCGATCAAGAGGCCAATACTGAGCTCAGAACCATCCATATCAGTGCATCAGTTGCAACCACATGATCAATTTATTATATTTGCATCTGATGGTCTCTGGGAGCACCTTAGCAATCAAGAAGCTGTTGATATAGTTCAAAACAATCCCCGCTCTGGAAGTGCAAGGAGGCTTGTGAAAGCTGCACTTCAAGAAGCAGCAAAAAAGAGAGAAATGAGATATTCAGATTTAAAGAAAATTGACCGAGGAGTTCGGCGACATTTCCATGATGATATCACTGTGGTTGTTATATATCTTGACTCAAATCTCATGAGTAGGGCAAGCACTGTCAAGTTCCCTAGTATTTCTGTTAGAGGGGGTGGTATTAACTTGCCTCACAACACACTGGCACCTTATACGACACCAACATAG 1179 0.4334 MLSELMNLLRACFRPGSDRYVRTGSDAGGKQDGLLWYKDSGQHLNGEFSMAVVQANNLLEDQSQIESGSLCSNESGPHGTFVGVYDGHGGPETSRFINKHLFQHLKRFTSEQQSMSVDVIRKAFQATEEGFMSVVSSQWSITPQIAAVGSCCLVGVICNGTLFIANLGDSRAVLGRAVKATGEVLAMQLSAEHNASIESVRQELQSLHPDDSNIVVLKHNVWRVKGLIQISRSIGDVYLKKAEFNREPLYAKFRLREPIKRPILSSEPSISVHQLQPHDQFIIFASDGLWEHLSNQEAVDIVQNNPRSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVVVIYLDSNLMSRASTVKFPSISVRGGGINLPHNTLAPYTTPT. 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g08309 392 CDD PP2Cc 48 355 IPR001932 -
Seca7g08309 392 SMART PP2C_4 39 353 IPR001932 -
Seca7g08309 392 FunFam Phosphatase 2C family protein 36 365 - -
Seca7g08309 392 ProSitePatterns PPM-type phosphatase domain signature. 81 89 IPR000222 GO:0043169
Seca7g08309 392 SUPERFAMILY PP2C-like 57 356 IPR036457 -
Seca7g08309 392 Gene3D - 36 365 IPR036457 -
Seca7g08309 392 ProSiteProfiles PPM-type phosphatase domain profile. 47 355 IPR001932 -
Seca7g08309 392 PANTHER PROTEIN PHOSPHATASE 39 353 IPR015655 GO:0004722|GO:0006470
Seca7g08309 392 Pfam Protein phosphatase 2C 67 324 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g08309 Seca-Chr7 187917842 187927575 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g08309 1 392 PP2C-type Phosphatase Gene Family AT4G38520 75.000 0.0 640
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g08309 - K01102 gmx:100794801 712.99