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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Seca7g08285
ATGGCTGCTCATTGTCCCCGCGGAAGTACTGCCATTTTGCCCATCCGTTTCTTCAAGATTATTCTAAAAACTAATCTTGAAAGGCTTAAAATACCTAATATGTTTACAAGGAGATATGGAGGCGGTCTCTCAGATCCAGTGTTTTTGAAGCCTCCAGATGGCACTGAATGGAAAATAGAGTTGCTAAAACAAAATGGTGAGGTTTGGTTCGGAAATGGTTGGGAAAAATTTGCTCAAAATTACTCTCTGGATCATGGATATTTGGTGCTGTTTACATATAAAGGAACTTGCCAGCTTGATGTAGTTATACTTGGCATGAGTGCTCTAGAAATAGATTATCCTCTGTGTGATCAAAATCAGAGTGAAGTTGATGAATCAGTTGAAATTTTGGATGAACCACCAAATAAGGATGCTGAGGCAGAGGCTGGACAGAAGAATTCTCATAAGAAAATGAGAGTCATAGGTGAGAATGAGATTGAGAAAGCTACTCAAAGAACTTCATCGTTGAATTGGCCAATGGATGCTAGAGCTCAGGAAGTAGCTGAAAAATTCGTCTCATACAATCCTTTTTTCACGGTTTGCATAAAGCCTATTGTTCTGAAAAAATGTCGGGTGAGTGTTCCAAATTTATTAAAAGCTTATATTGAGAAGAAGAAGAAGAATGAGTATGTGACTCTGCAGATTGGGAAAAGATCATGGAATGTAAAGTTGCTCTGTCGTCATGGCCATACCGGCCATCTCTCTGCTGGTTGGTCTGTGTTTGCAAAGGAAAGTGAATTGCAACCAGGGGACGTTTGTGTCTTTGAACTCATAAGTGAAGATTTAGTTTTTAAAGTGCATGTTTTCAAACGCCACAGTTTAGAGCATGAAAATTTGAACAAGTAG
885
0.3898
MAAHCPRGSTAILPIRFFKIILKTNLERLKIPNMFTRRYGGGLSDPVFLKPPDGTEWKIELLKQNGEVWFGNGWEKFAQNYSLDHGYLVLFTYKGTCQLDVVILGMSALEIDYPLCDQNQSEVDESVEILDEPPNKDAEAEAGQKNSHKKMRVIGENEIEKATQRTSSLNWPMDARAQEVAEKFVSYNPFFTVCIKPIVLKKCRVSVPNLLKAYIEKKKKNEYVTLQIGKRSWNVKLLCRHGHTGHLSAGWSVFAKESELQPGDVCVFELISEDLVFKVHVFKRHSLEHENLNK.
295
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Seca7g08285
294
PANTHER
B3 DOMAIN-CONTAINING
16
279
-
-
Seca7g08285
294
Gene3D
-
173
286
IPR015300
-
Seca7g08285
294
Pfam
B3 DNA binding domain
24
99
IPR003340
GO:0003677
Seca7g08285
294
Pfam
B3 DNA binding domain
190
284
IPR003340
GO:0003677
Seca7g08285
294
SUPERFAMILY
DNA-binding pseudobarrel domain
187
284
IPR015300
-
Seca7g08285
294
Gene3D
-
14
108
IPR015300
-
Seca7g08285
294
ProSiteProfiles
B3 DNA-binding domain profile.
190
285
IPR003340
GO:0003677
Seca7g08285
294
CDD
B3_DNA
190
283
IPR003340
GO:0003677
Seca7g08285
294
ProSiteProfiles
B3 DNA-binding domain profile.
14
107
IPR003340
GO:0003677
Seca7g08285
294
SMART
B3_2
17
107
IPR003340
GO:0003677
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Seca7g08285
Seca-Chr7
187692912
187694159
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Seca7g08285
13
287
B3 DNA Binding Superfamily
AT3G18990
27.616
3.30e-31
118
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
B3
Seca7g08285
B3
8.9e-14
CL0405
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Seca7g08285
-
-
gmx:102661781
306.219
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