Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g08241 ATGGGTAAGAGTAAGAAAACATTGAAGCTACCTTCTCTGTTCAAAACCAAGGAAGCACCAAAAAAACACCCTTGGCAACAATTCTTACCCTCTTGTGGCCACCCAAAAACCCTCTCTTTCCGATGTGGGACTGGGGATGACATTTTCAAAACAGTTAACTCTGTATTTTTTGACCCAACAGAGAGCACCATTGAAACTCCTAAATCCTGTTTCACAACCTCCTCTGAATGTGCAAGCTTTTCAACAGAATCAGAGGATTACTGCTACTATGATGGTGAATCTTTGGAGACATTGGTACGTGGGGTGAGGTCAGAGAGGCTGTTTTTTGAACCAGGTGGTGACACAAGCTCAATCTTGGAAGAGGCTAAGACTAGTGGATTTCCATACAAAGAGAGTGTGGTGATGGCTATGGAGTCAGAGGATCCTTATGAGGATTTTAAGAAATCAATGGAAGAGATGATTGAGTCTCATGGAGTGAAGGATTGGGAAGGTTTGGAGGAGCTATTGAGTTGGTATTTGAGGGTGAATGGTAAGAACAATCATGGGTACATAGTGGGTGCTTTTGTGGATTTACTCATTAGTATAGCAGCTTCTAATCATTCTAACTCTTGCTCTGATTCAACTACATATTCTTCTGCTGTTTCTTCTTTGCCTCCTTCACCATTGTATCCATCTCAGGGCCAGAATGAGATTGTTGAGGTTGAGCATGAAGATGCTGTAACCTCTTAG 729 0.4211 MGKSKKTLKLPSLFKTKEAPKKHPWQQFLPSCGHPKTLSFRCGTGDDIFKTVNSVFFDPTESTIETPKSCFTTSSECASFSTESEDYCYYDGESLETLVRGVRSERLFFEPGGDTSSILEEAKTSGFPYKESVVMAMESEDPYEDFKKSMEEMIESHGVKDWEGLEELLSWYLRVNGKNNHGYIVGAFVDLLISIAASNHSNSCSDSTTYSSAVSSLPPSPLYPSQGQNEIVEVEHEDAVTS. 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g08241 242 NCBIfam uncharacterized plant-specific domain TIGR01568 133 195 IPR006458 -
Seca7g08241 242 MobiDBLite consensus disorder prediction 207 229 - -
Seca7g08241 242 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 12 195 IPR038933 GO:0045892
Seca7g08241 242 Pfam Transcriptional repressor, ovate 139 195 IPR006458 -
Seca7g08241 242 ProSiteProfiles OVATE domain profile. 135 194 IPR006458 -
Seca7g08241 242 MobiDBLite consensus disorder prediction 207 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g08241 Seca-Chr7 187229971 187230699 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Seca7g08241 Ovate 3.9e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g08241 - - gmx:100527123 339.347